RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CLDN1O95832 211 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 DDAH2O95865 285 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 C1QAP02745 245 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 FHP07954 510 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 EDN3P14138 238 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 NCF1P14598 390 aaPredicted RBP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 IL10P22301 178 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 HNF4AP41235 474 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 GDF5P43026 501 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 SLC6A12P48065 614 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 HNMTP50135 292 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 TDGF1P3P51864 188 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 RAB8AP61006 207 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 AP2B1P63010 937 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 POU4F1Q01851 419 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 RGS1Q08116 209 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 CALCOCO2Q13137 446 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 RBBP5Q15291 538 aaKnown RBP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 NSDHLQ15738 373 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 INAQ16352 499 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 C4orf17Q53FE4 359 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 SFT2D3Q587I9 215 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 ABHD17BQ5VST6 288 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 ZNF324BQ6AW86 544 aaPredicted RBP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 FCRLBQ6BAA4 426 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 H3F3CQ6NXT2 135 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 PAPD4Q6PIY7 484 aaKnown RBP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 NXPE4Q6UWF7 544 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 FRA10AC1Q70Z53 315 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 ABHD13Q7L211 337 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 KLHDC8AQ8IYD2 350 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 TBC1D19Q8N5T2 526 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 BCORP1Q8N888 145 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 PLPP5Q8NEB5 264 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 CREB3L4Q8TEY5 395 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 TBC1D20Q96BZ9 403 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 RHBDF1Q96CC6 855 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 C5orf34Q96MH7 638 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 RBBP8Q99708 897 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 NPAS2Q99743 824 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 AIF1LQ9BQI0 150 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 TMEM79Q9BSE2 394 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 SLC6A16Q9GZN6 736 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 DERL2Q9GZP9 239 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 KLHL31Q9H511 634 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 OLAHQ9NV23 265 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 CTNNAL1Q9UBT7 734 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 ZGRF1Q86YA3 2104 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 UTP20O75691 2785 aaKnown RBP9.43□□□□□ -0.9
CMTM3-209ENST00000565003 FAM159BA6NKW6 160 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 A8MUI8 341 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 WDR47O94967 919 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 CCDC166P0CW27 439 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 GMPRP36959 345 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 ST13P50502 369 aaKnown RBP9.43□□□□□ -0.9
CMTM3-209ENST00000565003 SLC12A2P55011 1212 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 GPX6P59796 221 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 BTG2P78543 158 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 SRSF11Q05519 484 aaKnown RBP9.43□□□□□ -0.9
CMTM3-209ENST00000565003 USP10Q14694 798 aaKnown RBP9.43□□□□□ -0.9
CMTM3-209ENST00000565003 TGFBIQ15582 683 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 TRADDQ15628 312 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 EXT1Q16394 746 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 FBXO48Q5FWF7 155 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 SLCO4C1Q6ZQN7 724 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 MAATS1Q7Z4T9 603 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 BEST3Q8N1M1 668 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 TRPV3Q8NET8 790 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 NR4A3Q92570 626 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 CDKL2Q92772 493 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 GPR22Q99680 433 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 CPNE1Q99829 537 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 MMP25Q9NPA2 562 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 STMN3Q9NZ72 180 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 OSGIN2Q9Y236 505 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 CROCCQ5TZA2 2017 aa9.43□□□□□ -0.9
CMTM3-209ENST00000565003 DIDO1Q9BTC0 2240 aaKnown RBP9.42□□□□□ -0.9
CMTM3-209ENST00000565003 IGKV3D-11A0A0A0MRZ8 115 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 TAPBPO15533 448 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 LRRTM2O43300 516 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 PRAMEF4O60810 478 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 PRAMEF2O60811 474 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 B4GALT2O60909 372 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 FAM155BO75949 473 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 SERPINA6P08185 405 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 SMIM10L1P0DMW3 83 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 C1GALT1C1LP0DN25 315 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 CD1DP15813 335 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 STMN1P16949 149 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 GNAZP19086 355 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 MAOAP21397 527 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 JAK1P23458 1154 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 MST1P26927 711 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 COL8A1P27658 744 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 CASQ1P31415 396 aa9.42□□□□□ -0.9
CMTM3-209ENST00000565003 HNRNPH1P31943 449 aaKnown RBP9.42□□□□□ -0.9
CMTM3-209ENST00000565003 GP5P40197 560 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms