RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 SUSD1Q6UWL2 747 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 BNC2Q6ZN30 1099 aaPredicted RBP9.34□□□□□ -0.91
UBFD1-203ENST00000564106 GK5Q6ZS86 529 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 NET1Q7Z628 596 aaPredicted RBP9.34□□□□□ -0.91
UBFD1-203ENST00000564106 TRIM48Q8IWZ4 208 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 ULK2Q8IYT8 1036 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 DEFB107AQ8IZN7 70 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 DSELQ8IZU8 1212 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 ARL10Q8N8L6 244 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 Q8N9G6 341 aaPredicted RBP9.34□□□□□ -0.91
UBFD1-203ENST00000564106 ABHD11Q8NFV4 315 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 TTLQ8NG68 377 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 OR7G3Q8NG95 312 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 DNAJB8Q8NHS0 232 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 GPBAR1Q8TDU6 330 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 SPDL1Q96EA4 605 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 HBEGFQ99075 208 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 CENPKQ9BS16 269 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 THTPAQ9BU02 230 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 MENTQ9BUN1 341 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 C1orf50Q9BV19 199 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 NT5DC2Q9H857 520 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 WDR41Q9HAD4 459 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 PRM3Q9NNZ6 103 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 FARSBQ9NSD9 589 aaKnown RBP9.34□□□□□ -0.91
UBFD1-203ENST00000564106 POT1Q9NUX5 634 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 OR6C2Q9NZP2 312 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 LEF1Q9UJU2 399 aaPredicted RBP9.34□□□□□ -0.91
UBFD1-203ENST00000564106 WDR37Q9Y2I8 494 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 SSUH2Q9Y2M2 353 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 POLR3HQ9Y535 204 aaPredicted RBP9.34□□□□□ -0.91
UBFD1-203ENST00000564106 PCDHB11Q9Y5F2 797 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 SDK2Q58EX2 2172 aa9.34□□□□□ -0.91
UBFD1-203ENST00000564106 C15orf38-AP3S2A0A0A6YYH1 394 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 KRT87PA6NCN2 255 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 B4DGG1 531 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 D6RAR5 112 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 CFLARO15519 480 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 MGRN1O60291 552 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 EEDO75530 441 aaKnown RBP9.33□□□□□ -0.92
UBFD1-203ENST00000564106 FKBP9O95302 570 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 IL6P05231 212 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 RPLP0P05388 317 aaKnown RBP9.33□□□□□ -0.92
UBFD1-203ENST00000564106 G6PDP11413 515 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 PCNAP12004 261 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 WT1P19544 449 aaPredicted RBP9.33□□□□□ -0.92
UBFD1-203ENST00000564106 ITIH1P19827 911 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 CD22P20273 847 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 ASMTP46597 345 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 DUSP3P51452 185 aaPredicted RBP9.33□□□□□ -0.92
UBFD1-203ENST00000564106 SLC25A3Q00325 362 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 HMGCS1Q01581 520 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 CFHR1Q03591 330 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 CLN3Q13286 438 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 CLCA4Q14CN2 919 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 TGIF1Q15583 401 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 ICE2Q659A1 982 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 OGFOD3Q6PK18 319 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 SLC30A9Q6PML9 568 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 PAOXQ6QHF9 649 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 TMIGD1Q6UXZ0 262 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 RBM44Q6ZP01 1051 aaKnown RBP9.33□□□□□ -0.92
UBFD1-203ENST00000564106 ARPINQ7Z6K5 226 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 FAM13CQ8NE31 585 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 OR52E1Q8NGJ3 308 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 PROKR1Q8TCW9 393 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 JADE3Q92613 823 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 STMN2Q93045 179 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 UTP4Q969X6 686 aaKnown RBP9.33□□□□□ -0.92
UBFD1-203ENST00000564106 FCRL1Q96LA6 429 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 SLC46A1Q96NT5 459 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 HOPXQ9BPY8 73 aaPredicted RBP9.33□□□□□ -0.92
UBFD1-203ENST00000564106 DPY30Q9C005 99 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 ABCG4Q9H172 646 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 SPAG4Q9NPE6 437 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 PRDM8Q9NQV8 689 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 GEMIN8Q9NWZ8 242 aaKnown RBP9.33□□□□□ -0.92
UBFD1-203ENST00000564106 AHSPQ9NZD4 102 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 TBC1D29Q9UFV1 150 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 GIMAP2Q9UG22 337 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 CIDEBQ9UHD4 219 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 TAC3Q9UHF0 121 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 CFAP20Q9Y6A4 193 aaKnown RBP9.33□□□□□ -0.92
UBFD1-203ENST00000564106 BSNQ9UPA5 3926 aa9.33□□□□□ -0.92
UBFD1-203ENST00000564106 BOD1L1Q8NFC6 3051 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 A6NCN8 305 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 ANKDD1BA6NHY2 528 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 OR52A4PA6NMU1 304 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 PYCARD-AS1I3L0S3 204 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 ATXN7O15265 892 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-203ENST00000564106 B4GAT1O43505 415 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 PRAMEF4O60810 478 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 SEMA3DO95025 777 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 STAMBPO95630 424 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 CDH1P12830 882 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 AMD1P17707 334 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 DDX5P17844 614 aaKnown RBP9.32□□□□□ -0.92
UBFD1-203ENST00000564106 XRCC1P18887 633 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-203ENST00000564106 PRPS1L1P21108 318 aa9.32□□□□□ -0.92
UBFD1-203ENST00000564106 PTX3P26022 381 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms