RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 SH3GL2Q99962 352 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 MS4A8Q9BY19 250 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 GPN2Q9H9Y4 310 aaPredicted RBP12.74□□□□□ -0.37
CDH1-204ENST00000562118 ZNF304Q9HCX3 659 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 SLC17A7Q9P2U7 560 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 TRPS1Q9UHF7 1281 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 TCFL5Q9UL49 500 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 CDC14AQ9UNH5 594 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 STK38LQ9Y2H1 464 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 PCDHGA11Q9Y5H2 935 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 SCN3AQ9NY46 2000 aa12.74□□□□□ -0.37
CDH1-204ENST00000562118 SMG1Q96Q15 3661 aaKnown RBP12.73□□□□□ -0.37
CDH1-204ENST00000562118 SERTM1A2A2V5 107 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 H3BQF6 201 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 TM9SF1O15321 606 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 MLYCDO95822 493 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 PIM1P11309 404 aaPredicted RBP12.73□□□□□ -0.37
CDH1-204ENST00000562118 CPA3P15088 417 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 ALOX12P18054 663 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 CCNG1P51959 295 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 VAC14Q08AM6 782 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 GALNT1Q10472 559 aaPredicted RBP12.73□□□□□ -0.37
CDH1-204ENST00000562118 NKG7Q16617 165 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 C1orf189Q5VU69 101 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 RNF165Q6ZSG1 346 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 RPS27LQ71UM5 84 aaKnown RBP12.73□□□□□ -0.37
CDH1-204ENST00000562118 ENDOVQ8N8Q3 282 aaKnown RBP12.73□□□□□ -0.37
CDH1-204ENST00000562118 OR2Y1Q8NGV0 311 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 STARD8Q92502 1023 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 GAL3ST3Q96A11 431 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 RNF31Q96EP0 1072 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 MACROD1Q9BQ69 325 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 ZNF717Q9BY31 904 aaPredicted RBP12.73□□□□□ -0.37
CDH1-204ENST00000562118 KLHL31Q9H511 634 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 ACTL8Q9H568 366 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 ACTR8Q9H981 624 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 DMRT3Q9NQL9 472 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 ARGLU1Q9NWB6 273 aaPredicted RBP12.73□□□□□ -0.37
CDH1-204ENST00000562118 NXT1Q9UKK6 140 aaKnown RBP12.73□□□□□ -0.37
CDH1-204ENST00000562118 FARSAQ9Y285 508 aaKnown RBP12.73□□□□□ -0.37
CDH1-204ENST00000562118 RNF11Q9Y3C5 154 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 MAP4K5Q9Y4K4 846 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 CHD6Q8TD26 2715 aa12.73□□□□□ -0.37
CDH1-204ENST00000562118 URADA6NGE7 173 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 ZNF891A8MT65 544 aaPredicted RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 C9J4A7 227 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 UBFD1O14562 309 aaKnown RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 CREG1O75629 220 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 ESRRBO95718 433 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 UMODP07911 640 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 MYZAPP0CAP1 466 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 HPDP32754 393 aaPredicted RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 TSFMP43897 325 aaKnown RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 OR1D4P47884 311 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 CDH13P55290 713 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 PKNOX1P55347 436 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 STXBP1P61764 594 aaKnown RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 ZNF33BQ06732 778 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 IL10RAQ13651 578 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 MPP2Q14168 576 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 RBBP5Q15291 538 aaKnown RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 HIST2H2ACQ16777 129 aaPredicted RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 UGT8Q16880 541 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 TMEM35AQ53FP2 167 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 HIST2H2AA3Q6FI13 130 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 ABHD17CQ6PCB6 329 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 CCDC81Q6ZN84 652 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 ABHD13Q7L211 337 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 UBE3DQ7Z6J8 389 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 C10orf107Q8IVU9 208 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 ARMC2Q8NEN0 867 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 OR2L5Q8NG80 312 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 OR4F6Q8NGB9 312 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 OR9A4Q8NGU2 314 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 HUS1BQ8NHY5 278 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 AGAP11Q8TF27 550 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 REPS1Q96D71 796 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 FAM111AQ96PZ2 611 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 TRMOQ9BU70 441 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 SLC29A3Q9BZD2 475 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 SLC7A5P2Q9GIP4 190 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 MKKSQ9NPJ1 570 aaPredicted RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 SEMA4BQ9NPR2 832 aaPredicted RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 IRAK4Q9NWZ3 460 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 IFT80Q9P2H3 777 aaPredicted RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 CTSFQ9UBX1 484 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 ANGPTL3Q9Y5C1 460 aa12.72□□□□□ -0.37
CDH1-204ENST00000562118 MRPS18BQ9Y676 258 aaKnown RBP12.72□□□□□ -0.37
CDH1-204ENST00000562118 A0A0A6YYC8 382 aaPredicted RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 ANKDD1BA6NHY2 528 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 I3L1I5 382 aaPredicted RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 SPAG7O75391 227 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 SUPT7LO94864 414 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 KLHL18O94889 574 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 SEMA3DO95025 777 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 STATHP02808 62 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 ZNF888P0CJ79 500 aaPredicted RBP12.71□□□□□ -0.37
CDH1-204ENST00000562118 IL1RNP18510 177 aa12.71□□□□□ -0.37
CDH1-204ENST00000562118 FBLP22087 321 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms