RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 KCNAB2Q13303 367 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 TBCCQ15814 346 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 NDUFA9Q16795 377 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 FAAH2Q6GMR7 532 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 KLC3Q6P597 504 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 UBE3DQ7Z6J8 389 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 TDRPQ86YL5 185 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 ZNF843Q8N446 348 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 LSM14AQ8ND56 463 aaKnown RBP13.15□□□□□ -0.3
TPM1-230ENST00000561266 OR51Q1Q8NH59 317 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 ZBTB9Q96C00 473 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 PTCD3Q96EY7 689 aaKnown RBP13.15□□□□□ -0.3
TPM1-230ENST00000561266 MRPL57Q9BQC6 102 aaKnown RBP13.15□□□□□ -0.3
TPM1-230ENST00000561266 RBCK1Q9BYM8 510 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 ANKHQ9HCJ1 492 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 ZNF71Q9NQZ8 489 aaPredicted RBP13.15□□□□□ -0.3
TPM1-230ENST00000561266 PCTPQ9UKL6 214 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 RAB21Q9UL25 225 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 CDC14AQ9UNH5 594 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 MAP4K5Q9Y4K4 846 aa13.15□□□□□ -0.3
TPM1-230ENST00000561266 CCDC189A1A4V9 331 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 LRIT2A6NDA9 550 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 H0YIG0 161 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 DLX3O60479 287 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 SH3BGRLO75368 114 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 SERPINA6P08185 405 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 SLC35G6P0C7Q6 338 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 ALOX12P18054 663 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 TSPAN8P19075 237 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 MMP11P24347 488 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 AVPR1BP47901 424 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 PIK3CGP48736 1102 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 OCA2Q04671 838 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 Q0VFX4 171 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 RAPSNQ13702 412 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 GTF2H2Q13888 395 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 RUNX2Q13950 521 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 TSNAXIP1Q2TAA8 658 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 LGSNQ5TDP6 509 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 GTF2H2CQ6P1K8 395 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 RAB43Q86YS6 212 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 TRPV3Q8NET8 790 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 OR11G2Q8NGC1 345 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 OR52B6Q8NGF0 335 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 ZNF473Q8WTR7 871 aaKnown RBP13.14□□□□□ -0.31
TPM1-230ENST00000561266 CAVIN3Q969G5 261 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 MS4A6EQ96DS6 147 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 PEX11GQ96HA9 241 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 QRFPRQ96P65 431 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 CDK15Q96Q40 435 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 F2RL3Q96RI0 385 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 CRB3Q9BUF7 120 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 CAPS2Q9BXY5 557 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 TGIF2Q9GZN2 237 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 MRPL46Q9H2W6 279 aaKnown RBP13.14□□□□□ -0.31
TPM1-230ENST00000561266 RHBGQ9H310 441 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 MKKSQ9NPJ1 570 aaPredicted RBP13.14□□□□□ -0.31
TPM1-230ENST00000561266 LANCL2Q9NS86 450 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 C3orf18Q9UK00 162 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 ZNF225Q9UK10 706 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 TP53TG5Q9Y2B4 290 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 RNF11Q9Y3C5 154 aa13.14□□□□□ -0.31
TPM1-230ENST00000561266 TLDC2A0PJX2 215 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 A6NL46 340 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 IDSB3KWA1 339 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 FAM227AF5H4B4 570 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 CHST10O43529 356 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 CEACAM4O75871 244 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 NUDT17P0C025 328 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 EPB42P16452 691 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 CXCR2P25025 360 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 XCR1P46094 333 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 EMP2P54851 167 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 CDH13P55290 713 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 RGS1Q08116 209 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 ADPRMQ3LIE5 342 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 UNC50Q53HI1 259 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 GRHL2Q6ISB3 625 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 LANCL3Q6ZV70 420 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 LAS2Q8IYD9 372 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 KRT78Q8N1N4 520 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 FDCSPQ8NFU4 85 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 OR7G3Q8NG95 312 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 ACMSDQ8TDX5 336 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 CCT6BQ92526 530 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 CCDC77Q9BR77 488 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 EFCAB11Q9BUY7 163 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 NUDT9Q9BW91 350 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 VN1R1Q9GZP7 353 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 ADNPQ9H2P0 1102 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 NOL11Q9H8H0 719 aaKnown RBP13.13□□□□□ -0.31
TPM1-230ENST00000561266 IPPKQ9H8X2 491 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 FBXL4Q9UKA2 621 aa13.13□□□□□ -0.31
TPM1-230ENST00000561266 G3V2L1 256 aa13.12□□□□□ -0.31
TPM1-230ENST00000561266 STX16-NPEPL1H3BU86 382 aa13.12□□□□□ -0.31
TPM1-230ENST00000561266 AGPSO00116 658 aa13.12□□□□□ -0.31
TPM1-230ENST00000561266 STX16O14662 325 aa13.12□□□□□ -0.31
TPM1-230ENST00000561266 CLEC3AO75596 197 aa13.12□□□□□ -0.31
TPM1-230ENST00000561266 CELA2AP08217 269 aa13.12□□□□□ -0.31
TPM1-230ENST00000561266 RPS17P08708 135 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms