RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 A0A1B0GTL3 188 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 SERTM1A2A2V5 107 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 VSTM2BA6NLU5 285 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 PPP6CO00743 305 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 GALR3O60755 368 aaPredicted RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 KLF7O75840 302 aaPredicted RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 DHRS4L1P0CG22 281 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 ALOX12P18054 663 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 WT1P19544 449 aaPredicted RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 ITPKBP27987 946 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 PTPN4P29074 926 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 HNRNPH1P31943 449 aaKnown RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 AVPR1BP47901 424 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 NAGLUP54802 743 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 PKNOX1P55347 436 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 TMPRSS3P57727 454 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 STXBP1P61764 594 aaKnown RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 SNRPNP63162 240 aaKnown RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 MC1RQ01726 317 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 ZNF33BQ06732 778 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 VAC14Q08AM6 782 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 GALNT1Q10472 559 aaPredicted RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 DSG2Q14126 1118 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 NCF4Q15080 339 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 AGBL2Q5U5Z8 902 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 C1orf189Q5VU69 101 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 CCDC81Q6ZN84 652 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 FRMD7Q6ZUT3 714 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 ABHD13Q7L211 337 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 MILR1Q7Z6M3 343 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 SYVN1Q86TM6 617 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 AMER3Q8N944 861 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 SRFBP1Q8NEF9 429 aaKnown RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 ARMC2Q8NEN0 867 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 OR4F6Q8NGB9 312 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 PPP4R1Q8TF05 950 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 ATP6V1E2Q96A05 226 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 GAL3ST3Q96A11 431 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 NACC2Q96BF6 587 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 MS4A6EQ96DS6 147 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 CMTM7Q96FZ5 175 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 DCBLD2Q96PD2 775 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 RUFY1Q96T51 708 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 SH3GL2Q99962 352 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 MACROD1Q9BQ69 325 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 TRMOQ9BU70 441 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 MS4A8Q9BY19 250 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 ANKHQ9HCJ1 492 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 SEMA4BQ9NPR2 832 aaPredicted RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 IFT80Q9P2H3 777 aaPredicted RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 NDOR1Q9UHB4 597 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 IL17BQ9UHF5 180 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 NXT1Q9UKK6 140 aaKnown RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 MRPS2Q9Y399 296 aaKnown RBP9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 MAP4K5Q9Y4K4 846 aa9.14□□□□□ -0.95
RABGGTA-221ENST00000561055 LAMA5O15230 3695 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 A0A0A6YYC8 382 aaPredicted RBP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 GOLGA6L10A6NI86 522 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 C9J4A7 227 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 I3L1I5 382 aaPredicted RBP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 BIRC5O15392 142 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 NPHS1O60500 1241 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 CNOT3O75175 753 aaKnown RBP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 CREG1O75629 220 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 SCELO95171 688 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 ZWINTO95229 277 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 ESRRBO95718 433 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 ENO1P06733 434 aaKnown RBP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 BPGMP07738 259 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 CYC1P08574 325 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 IL10P22301 178 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 PTX3P26022 381 aaPredicted RBP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 ALDH3A1P30838 453 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 SERPINB5P36952 375 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 TSFMP43897 325 aaKnown RBP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 OR1D4P47884 311 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 SKP1P63208 163 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 LCP2Q13094 533 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 SRSF6Q13247 344 aaKnown RBP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 CUL3Q13618 768 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 MPP2Q14168 576 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 ZRSR2Q15696 482 aaKnown RBP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 NKG7Q16617 165 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 CPSF6Q16630 551 aaKnown RBP eCLIP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 TMEM35AQ53FP2 167 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 DEPDC1Q5TB30 811 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 FRG2Q64ET8 278 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 ADNP2Q6IQ32 1131 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 LETMD1Q6P1Q0 360 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 GPRIN3Q6ZVF9 776 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 CHSY3Q70JA7 882 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 RPS27LQ71UM5 84 aaKnown RBP9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 PRSS41Q7RTY9 318 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 VASH2Q86V25 355 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 PDSS2Q86YH6 399 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 C10orf107Q8IVU9 208 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 DTWD1Q8N5C7 304 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 CCDC63Q8NA47 563 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 OR2L5Q8NG80 312 aa9.13□□□□□ -0.95
RABGGTA-221ENST00000561055 OR9A4Q8NGU2 314 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms