RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 ANKRD53Q8N9V6 530 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 M1APQ8TC57 530 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 NT5CQ8TCD5 201 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 UTP15Q8TED0 518 aaKnown RBP9.62□□□□□ -0.87
LDLR-214ENST00000560628 NR4A3Q92570 626 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 TBC1D20Q96BZ9 403 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 ZNF354BQ96LW1 612 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 AIF1LQ9BQI0 150 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 SARGQ9BW04 601 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 RNF32Q9H0A6 362 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 DPH5Q9H2P9 285 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 RHBGQ9H310 441 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 KLHL1Q9NR64 748 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 SMYD2Q9NRG4 433 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 CTNNAL1Q9UBT7 734 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 ZFP69BQ9UJL9 534 aa9.62□□□□□ -0.87
LDLR-214ENST00000560628 MTO1Q9Y2Z2 717 aaKnown RBP9.62□□□□□ -0.87
LDLR-214ENST00000560628 UTP20O75691 2785 aaKnown RBP9.61□□□□□ -0.87
LDLR-214ENST00000560628 NCF1BA6NI72 391 aaPredicted RBP9.61□□□□□ -0.87
LDLR-214ENST00000560628 A8MUA0 341 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 NCF1CA8MVU1 366 aaPredicted RBP9.61□□□□□ -0.87
LDLR-214ENST00000560628 MAGEB17A8MXT2 336 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 CXorf49A8MYA2 514 aaPredicted RBP9.61□□□□□ -0.87
LDLR-214ENST00000560628 E7ESA3 106 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 FANCGO15287 622 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 H2AFYO75367 372 aaKnown RBP9.61□□□□□ -0.87
LDLR-214ENST00000560628 UNC5CO95185 931 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 STSP08842 583 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 MYBL2P10244 700 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 NCF1P14598 390 aaPredicted RBP9.61□□□□□ -0.87
LDLR-214ENST00000560628 IL10P22301 178 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 SSTR1P30872 391 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 AHRP35869 848 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 CD96P40200 585 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 TDGF1P3P51864 188 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 PER3P56645 1201 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 REEP5Q00765 189 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 HYAL2Q12891 473 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 USP10Q14694 798 aaKnown RBP9.61□□□□□ -0.87
LDLR-214ENST00000560628 EXT1Q16394 746 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 MEP1AQ16819 746 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 ZNF766Q5HY98 468 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 TOR1AIP1Q5JTV8 583 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 SPINK14Q6IE38 97 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 ABHD13Q7L211 337 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 KIF2BQ8N4N8 673 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 PYROXD1Q8WU10 500 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 VPS39Q96JC1 886 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 PTCHD1Q96NR3 888 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 SIGLEC12Q96PQ1 595 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 OR1F2PQ96R84 312 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 LPAR4Q99677 370 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 NPAS2Q99743 824 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 HES7Q9BYE0 225 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 RHOJQ9H4E5 214 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 CDCP1Q9H5V8 836 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 CAB39LQ9H9S4 337 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 PELI2Q9HAT8 420 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 GPAMQ9HCL2 828 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 MMP25Q9NPA2 562 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 SAYSD1Q9NPB0 183 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 SEC14L3Q9UDX4 400 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 OARD1Q9Y530 152 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 KCNE2Q9Y6J6 123 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 SCN2AQ99250 2005 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 CACNA1DQ01668 2161 aa9.61□□□□□ -0.87
LDLR-214ENST00000560628 DIDO1Q9BTC0 2240 aaKnown RBP9.6□□□□□ -0.87
LDLR-214ENST00000560628 TRGV8A0A0C4DH27 118 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 A0A0G2JN53 185 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 A0A1B0GUH1 482 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 NDC80O14777 642 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 PRMT3O60678 531 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 WDR47O94967 919 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 CRYABP02511 175 aaKnown RBP9.6□□□□□ -0.87
LDLR-214ENST00000560628 SMIM10L1P0DMW3 83 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 C1GALT1C1LP0DN25 315 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 MAOAP21397 527 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 SLC12A2P55011 1212 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 SLC26A5P58743 744 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 SKP1P63208 163 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 BTN3A2P78410 334 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 OC90Q02509 493 aaPredicted RBP9.6□□□□□ -0.87
LDLR-214ENST00000560628 TUBA3CQ13748 450 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 INAQ16352 499 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 FBXO48Q5FWF7 155 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 TUBA3EQ6PEY2 450 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 SLCO4C1Q6ZQN7 724 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 FRA10AC1Q70Z53 315 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 TRPV3Q8NET8 790 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 DNAJB8Q8NHS0 232 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 CREB3L4Q8TEY5 395 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 CCT6BQ92526 530 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 ANKRD7Q92527 254 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 ANP32BQ92688 251 aaKnown RBP9.6□□□□□ -0.87
LDLR-214ENST00000560628 ESAMQ96AP7 390 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 RHBDF1Q96CC6 855 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 SMIM10Q96HG1 83 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 UTP23Q9BRU9 249 aaKnown RBP9.6□□□□□ -0.87
LDLR-214ENST00000560628 SLC6A16Q9GZN6 736 aa9.6□□□□□ -0.87
LDLR-214ENST00000560628 AICDAQ9GZX7 198 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms