RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PRPF4O43172 522 aaKnown RBP eCLIP15.96■□□□□ 0.15
RPL28-209ENST00000560055 SERPIND1P05546 499 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 UMODP07911 640 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 PRKAR1AP10644 381 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 ALOX12P18054 663 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 IL1RNP18510 177 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 AVPR1BP47901 424 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 FOXL2P58012 376 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 TRAF3Q13114 568 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 ERV3-1Q14264 604 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 HIST2H2ACQ16777 129 aaPredicted RBP15.96■□□□□ 0.15
RPL28-209ENST00000560055 ADPRMQ3LIE5 342 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 UNC50Q53HI1 259 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 ZNF678Q5SXM1 525 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 HIST2H2AA3Q6FI13 130 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 MED27Q6P2C8 311 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 LRIG3Q6UXM1 1119 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 RPS27LQ71UM5 84 aaKnown RBP15.96■□□□□ 0.15
RPL28-209ENST00000560055 SRRM1Q8IYB3 904 aaKnown RBP15.96■□□□□ 0.15
RPL28-209ENST00000560055 OR7G3Q8NG95 312 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 L3HYPDHQ96EM0 354 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 KLHL31Q9H511 634 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 ANKHQ9HCJ1 492 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 ZNF282Q9UDV7 671 aaPredicted RBP15.96■□□□□ 0.15
RPL28-209ENST00000560055 NXT1Q9UKK6 140 aaKnown RBP15.96■□□□□ 0.15
RPL28-209ENST00000560055 PLLPQ9Y342 182 aa15.96■□□□□ 0.15
RPL28-209ENST00000560055 ANKDD1BA6NHY2 528 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 GALR3O60755 368 aaPredicted RBP15.95■□□□□ 0.14
RPL28-209ENST00000560055 KLHL18O94889 574 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 ZNF888P0CJ79 500 aaPredicted RBP15.95■□□□□ 0.14
RPL28-209ENST00000560055 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 IMPDH1P20839 514 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 HNRNPH1P31943 449 aaKnown RBP15.95■□□□□ 0.14
RPL28-209ENST00000560055 CDH13P55290 713 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 CEP85LQ5SZL2 805 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 ABHD13Q7L211 337 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 RDH11Q8TC12 318 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 ZNF473Q8WTR7 871 aaKnown RBP15.95■□□□□ 0.14
RPL28-209ENST00000560055 MS4A6EQ96DS6 147 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 CATSPER2Q96P56 530 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 UBL7Q96S82 380 aaPredicted RBP15.95■□□□□ 0.14
RPL28-209ENST00000560055 TGIF2Q9GZN2 237 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 SENP1Q9P0U3 644 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 RNF11Q9Y3C5 154 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 PTRH2Q9Y3E5 179 aaKnown RBP15.95■□□□□ 0.14
RPL28-209ENST00000560055 NAALAD2Q9Y3Q0 740 aa15.95■□□□□ 0.14
RPL28-209ENST00000560055 CCDC88CQ9P219 2028 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 A0A1B0GTL3 188 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 URADA6NGE7 173 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 SGK494L7N484 410 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 PPP6CO00743 305 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 RGS16O15492 202 aaPredicted RBP15.94■□□□□ 0.14
RPL28-209ENST00000560055 CLDN9O95484 217 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 ITGB2P05107 769 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 ZGLP1P0C6A0 271 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 MYL2P10916 166 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 CREB1P16220 341 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 SERPINB1P30740 379 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 CCNG1P51959 295 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 STXBP1P61764 594 aaKnown RBP15.94■□□□□ 0.14
RPL28-209ENST00000560055 MAT1AQ00266 395 aaKnown RBP15.94■□□□□ 0.14
RPL28-209ENST00000560055 SSPNQ14714 243 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 SYT16Q17RD7 645 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 GGTA1PQ4G0N0 100 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 DEFB134Q4QY38 66 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 VWA2Q5GFL6 755 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 TOR1AIP1Q5JTV8 583 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 NIPAL1Q6NVV3 410 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 CROCCP2Q86T23 111 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 SHISA5Q8N114 240 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 STT3BQ8TCJ2 826 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 TTC9Q92623 222 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 CCDC126Q96EE4 140 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 CDK15Q96Q40 435 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 SMC6Q96SB8 1091 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 MS4A8Q9BY19 250 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 REXO4Q9GZR2 422 aaKnown RBP15.94■□□□□ 0.14
RPL28-209ENST00000560055 MKKSQ9NPJ1 570 aaPredicted RBP15.94■□□□□ 0.14
RPL28-209ENST00000560055 SEMA4BQ9NPR2 832 aaPredicted RBP15.94■□□□□ 0.14
RPL28-209ENST00000560055 TRPC4Q9UBN4 977 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 ADGRE2Q9UHX3 823 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 ZNF225Q9UK10 706 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 PCDHGA11Q9Y5H2 935 aa15.94■□□□□ 0.14
RPL28-209ENST00000560055 CDC14CA4D256 554 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 FFAR3O14843 346 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 GPR42O15529 346 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 TYROBPO43914 113 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 RDH16O75452 317 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 SUPT7LO94864 414 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 B3GALT4O96024 378 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 OTCP00480 354 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 FOLR3P41439 243 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 PIK3CBP42338 1070 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 DNAJB13P59910 316 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 RHDQ02161 417 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 OCA2Q04671 838 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 CLCQ05315 142 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 CPSF6Q16630 551 aaKnown RBP eCLIP15.93■□□□□ 0.14
RPL28-209ENST00000560055 LETMD1Q6P1Q0 360 aa15.93■□□□□ 0.14
RPL28-209ENST00000560055 PCSK4Q6UW60 755 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms