RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SLC6A7Q99884 636 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 RPF2Q9H7B2 306 aaKnown RBP13.53□□□□□ -0.24
SPG11-210ENST00000558319 METTL7AQ9H8H3 244 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 CAPN14A8MX76 684 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 HLA-DQB2P05538 268 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 GRPRP30550 384 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 CRISP3P54108 245 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 ERVK-8P63133 956 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 FPGSQ05932 587 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 ZNF773Q6PK81 442 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 TMEM151AQ8N4L1 468 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 NKD2Q969F2 451 aaPredicted RBP13.53□□□□□ -0.24
SPG11-210ENST00000558319 PYURFQ96I23 114 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 SCGB3A2Q96PL1 93 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 ANKHQ9HCJ1 492 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 TRIM36Q9NQ86 728 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 MATN3O15232 486 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 SMSP52788 366 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 DSTNP60981 165 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 HERVK_113P63132 956 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 C1orf61Q13536 156 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 ZDHHC24Q6UX98 284 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 CMTM8Q8IZV2 173 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 PLA2G15Q8NCC3 412 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 PHOSPHO1Q8TCT1 267 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 FCAMRQ8WWV6 532 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 TCEAL4Q96EI5 215 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 ERVK-6Q9BXR3 956 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 FZD3Q9NPG1 666 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 KCTD3Q9Y597 815 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 VILLO15195 856 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 EPCAMP16422 314 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 S100PP25815 95 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 GPX6P59796 221 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 EIPR1Q53HC9 387 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 PAMR1Q6UXH9 720 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 BIRC7Q96CA5 298 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 TMEM209Q96SK2 561 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 OR2B2Q9GZK3 357 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 C11orf49Q9H6J7 331 aa13.53□□□□□ -0.24
SPG11-210ENST00000558319 GPD2P43304 727 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 SEC23BQ15437 767 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 FBXO43Q4G163 708 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 SAMD12Q8N8I0 201 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 SCRN2Q96FV2 425 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 TUBG2Q9NRH3 451 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 EBF1Q9UH73 591 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 RUVBL1Q9Y265 456 aaKnown RBP13.52□□□□□ -0.24
SPG11-210ENST00000558319 TRBC2A0A5B9 178 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 TMEM150CB9EJG8 249 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 DLGAP1O14490 977 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 PROM1O43490 865 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 FGF19O95750 216 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 H1F0P07305 194 aaKnown RBP13.52□□□□□ -0.24
SPG11-210ENST00000558319 SRYQ05066 204 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 ENPP2Q13822 863 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 COL28A1Q2UY09 1125 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 CARD16Q5EG05 197 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 KANSL1Q7Z3B3 1105 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 C3orf58Q8NDZ4 430 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 DCAKDQ8WVC6 231 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 TIFAQ96CG3 184 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 ZBED6CLQ96FA7 236 aaPredicted RBP13.52□□□□□ -0.24
SPG11-210ENST00000558319 KCNA7Q96RP8 456 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 TREX2Q9BQ50 279 aaPredicted RBP13.52□□□□□ -0.24
SPG11-210ENST00000558319 OR51I1Q9H343 314 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 ATRNL1Q5VV63 1379 aa13.52□□□□□ -0.24
SPG11-210ENST00000558319 K7EPI3 171 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 RAB36O95755 333 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 PGGT1BP53609 377 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 HYAL4Q2M3T9 481 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 MBLAC2Q68D91 279 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 PAQR3Q6TCH7 311 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 ZC3HC1Q86WB0 502 aaKnown RBP13.52□□□□□ -0.25
SPG11-210ENST00000558319 TMEM126BQ8IUX1 230 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 C12orf76Q8N812 135 aaPredicted RBP13.52□□□□□ -0.25
SPG11-210ENST00000558319 PSD4Q8NDX1 1056 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 UTS2RQ9UKP6 389 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 ABCA9Q8IUA7 1624 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 RFPL1O75677 317 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 UBXN7O94888 489 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 GTF2F2P13984 249 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 PRKACBP22694 351 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 VIPR1P32241 457 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 EVI2BP34910 448 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 AIF1P55008 147 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 CDK10Q15131 360 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 LIPKQ5VXJ0 399 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 GDPD4Q6W3E5 623 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 UBQLNLQ8IYU4 475 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 TEX19Q8NA77 164 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 OR6Q1Q8NGQ2 317 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 SHKBP1Q8TBC3 707 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 ZNF675Q8TD23 568 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 OTUB2Q96DC9 234 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 TAS2R9Q9NYW1 312 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 NDUFAF4Q9P032 175 aa13.52□□□□□ -0.25
SPG11-210ENST00000558319 DKKL1Q9UK85 242 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms