RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 RNF31Q96EP0 1072 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 PRR11Q96HE9 360 aaPredicted RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 DEPDC7Q96QD5 511 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 ZBTB18Q99592 522 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 CMKLR1Q99788 373 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 NUDT22Q9BRQ3 303 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 SLC6A16Q9GZN6 736 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 WDR55Q9H6Y2 383 aaPredicted RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 COPS7BQ9H9Q2 264 aaPredicted RBP11.84□□□□□ -0.51
TPM1-209ENST00000558072 IRAK4Q9NWZ3 460 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 HEY2Q9UBP5 337 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 KLHL3Q9UH77 587 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 MCM8Q9UJA3 840 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 CDC14AQ9UNH5 594 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 SRPK3Q9UPE1 567 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 KLHL20Q9Y2M5 609 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 CCL27Q9Y4X3 112 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 SLC22A7Q9Y694 548 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 SPACA6W5XKT8 324 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 ADAMTS20P59510 1910 aa11.84□□□□□ -0.51
TPM1-209ENST00000558072 UNC13CQ8NB66 2214 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 IGHV5-10-1A0A0J9YXX1 117 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 ATP6AP2A0A1C7CYW4 349 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 DYTNA2CJ06 578 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 PRMT3O60678 531 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 CTSVO60911 334 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 ATP6AP2O75787 350 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 CEACAM1P13688 526 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 PVRP15151 417 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 HOXD11P31277 338 aaPredicted RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 LSSP48449 732 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 CLNS1AP54105 237 aaKnown RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 ITGA1P56199 1179 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 HMGCS1Q01581 520 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 ZFP36L1Q07352 338 aaKnown RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 CYP4F3Q08477 520 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 FAM53BQ14153 422 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 SQLEQ14534 574 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 RSPO4Q2I0M5 234 aaPredicted RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 MUM1Q2TAK8 710 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 GALNTL6Q49A17 601 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 TCHHL1Q5QJ38 904 aaPredicted RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 SNAP47Q5SQN1 464 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 PHF19Q5T6S3 580 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 VWA5B1Q5TIE3 1220 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 MAVSQ7Z434 540 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 SLITRK4Q8IW52 837 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 MIER2Q8N344 545 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 NATD1Q8N6N6 113 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 GLB1L3Q8NCI6 653 aaPredicted RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 ADAMTS18Q8TE60 1221 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 CHTF18Q8WVB6 975 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 MVB12AQ96EY5 273 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 THOC1Q96FV9 657 aaKnown RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 ZNF285Q96NJ3 590 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 PRPF18Q99633 342 aaKnown RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 ZPBPQ9BS86 351 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 NPLQ9BXD5 320 aaPredicted RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 SPNS1Q9H2V7 528 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 FARSBQ9NSD9 589 aaKnown RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 TOR4AQ9NXH8 423 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 MS4A12Q9NXJ0 267 aa11.83□□□□□ -0.52
TPM1-209ENST00000558072 ZFHX2Q9C0A1 2572 aaPredicted RBP11.83□□□□□ -0.52
TPM1-209ENST00000558072 BLACEA4D250 179 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 FITM1A5D6W6 292 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 EBAG9O00559 213 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 KIF1CO43896 1103 aaKnown RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 PRAMEF10O60809 474 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 EIF2S1P05198 315 aaKnown RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 HOXB3P14651 431 aaPredicted RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 TIA1P31483 386 aaKnown RBP eCLIP11.82□□□□□ -0.525e-8■□□□□ 8.7
TPM1-209ENST00000558072 SSR2P43308 183 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 AVPR1BP47901 424 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 SEPHS1P49903 392 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 MNAT1P51948 309 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 VSX2P58304 361 aaPredicted RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 RAB15P59190 212 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 RPL38P63173 70 aaKnown RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 CYP4F2P78329 520 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 SLC9A5Q14940 896 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 DPY19L1Q2PZI1 675 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 PDCD4Q53EL6 469 aaKnown RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 TOR1AIP1Q5JTV8 583 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 WASHC2DQ5SRD0 308 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 OR4C11Q6IEV9 310 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 NOXRED1Q6NXP6 359 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 CYP20A1Q6UW02 462 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 SCIMPQ6UWF3 145 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 IKBIPQ70UQ0 350 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 R3HCC1LQ7Z5L2 792 aaKnown RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 SLCO6A1Q86UG4 719 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 PLD3Q8IV08 490 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 ZCCHC7Q8N3Z6 543 aaKnown RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 CPSF7Q8N684 471 aaKnown RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 TSPEARQ8WU66 669 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 MS4A6EQ96DS6 147 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 FCRL1Q96LA6 429 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 PPP1R36Q96LQ0 422 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 CCDC74BQ96LY2 380 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 C3orf30Q96M34 536 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms