RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 RSC1A1Q92681 617 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 NEIL2Q969S2 332 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 SKA1Q96BD8 255 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 CXorf40BQ96DE9 158 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 CCDC126Q96EE4 140 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 PEX11GQ96HA9 241 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 HIST1H2AHQ96KK5 128 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 CNDP1Q96KN2 507 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 APOLD1Q96LR9 279 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 C7orf26Q96N11 449 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 ZNF382Q96SR6 550 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 HIST1H2AJQ99878 128 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 H2AFJQ9BTM1 129 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 TUBB1Q9H4B7 451 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 SLC32A1Q9H598 525 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 RABEP2Q9H5N1 569 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 NOL11Q9H8H0 719 aaKnown RBP5.71□□□□□ -1.5
FOXN3-218ENST00000557718 KCNK13Q9HB14 408 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 SLC6A20Q9NP91 592 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 POT1Q9NUX5 634 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 DNAJC11Q9NVH1 559 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 GMEB2Q9UKD1 530 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 PCDHB10Q9UN67 800 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 PTGDR2Q9Y5Y4 395 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 HEBP2Q9Y5Z4 205 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 RNF215Q9Y6U7 377 aa5.71□□□□□ -1.5
FOXN3-218ENST00000557718 PTPRZ1P23471 2315 aaPredicted RBP5.71□□□□□ -1.5
FOXN3-218ENST00000557718 SDK2Q58EX2 2172 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 LILRA5A6NI73 299 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 OR5K4A6NMS3 321 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 SRRM3A6NNA2 597 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 B4GAT1O43505 415 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 PCDHGA12O60330 932 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 PRAMEF10O60809 474 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 H2AFYO75367 372 aaKnown RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 PPM1BO75688 479 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 CER1O95813 267 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 TBX6O95947 436 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 VIPP01282 170 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 RPN2P04844 631 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ZNF883P0CG24 379 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 CDH1P12830 882 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 CD59P13987 128 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ALOX15P16050 662 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 GRK2P25098 689 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 NDUFS1P28331 727 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 SERPINB3P29508 390 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 CSF2RBP32927 897 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 SHMT2P34897 504 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 SERPINB5P36952 375 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 PIK3CGP48736 1102 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ARRB1P49407 418 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 MEF2AQ02078 507 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 GALNT1Q10472 559 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 SF3A3Q12874 501 aaKnown RBP eCLIP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 CDC16Q13042 620 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 LCP2Q13094 533 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 TUBB3Q13509 450 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 COL9A2Q14055 689 aaPredicted RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 CATSPEREQ5SY80 951 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 VWA5B1Q5TIE3 1220 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 KIAA1614Q5VZ46 1190 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 KANK2Q63ZY3 851 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ATG16L1Q676U5 607 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 CLEC6AQ6EIG7 209 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 METTL2BQ6P1Q9 378 aaKnown RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 LCTLQ6UWM7 567 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 GPRIN3Q6ZVF9 776 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 TMPRSS9Q7Z410 1059 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 CUZD1Q86UP6 607 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 TRIM73Q86UV7 250 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 AMIGO1Q86WK6 493 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 RNF175Q8N4F7 328 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ARHGEF39Q8N4T4 335 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 EID2Q8N6I1 236 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ARL10Q8N8L6 244 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 L3MBTL4Q8NA19 623 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ZNF740Q8NDX6 193 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 OR4E2Q8NGC2 313 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 RFWD2Q8NHY2 731 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 AGR3Q8TD06 166 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ZFPM2Q8WW38 1151 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 LCN9Q8WX39 176 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ATL1Q8WXF7 558 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 SMPDL3AQ92484 453 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 WDR34Q96EX3 536 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 THOC1Q96FV9 657 aaKnown RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 CHMP6Q96FZ7 201 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 MED8Q96G25 268 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 OR2A14Q96R47 310 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 NTMT1Q9BV86 223 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ACAT2Q9BWD1 397 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 GTPBP2Q9BX10 602 aaKnown RBP5.7□□□□□ -1.5
FOXN3-218ENST00000557718 TRIM54Q9BYV2 358 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 AICDAQ9GZX7 198 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 ABCG4Q9H172 646 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 EPN3Q9H201 632 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 IPPKQ9H8X2 491 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 UCK1Q9HA47 277 aa5.7□□□□□ -1.5
FOXN3-218ENST00000557718 MID1IP1Q9NPA3 183 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms