RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TXN2Q99757 166 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 NTPCRQ9BSD7 190 aaKnown RBP2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CRACR2AQ9BSW2 395 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CARD6Q9BX69 1037 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 LRRC2Q9BYS8 371 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 OR2B2Q9GZK3 357 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 DPEP2Q9H4A9 486 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 TMEM231Q9H6L2 316 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 GAREM1Q9H706 876 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 ECT2Q9H8V3 914 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 FGF21Q9NSA1 209 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CENPMQ9NSP4 180 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 IL20RAQ9UHF4 553 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SLC12A6Q9UHW9 1150 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 POU2F3Q9UKI9 436 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SMC3Q9UQE7 1217 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 COLEC10Q9Y6Z7 277 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 R4GN57 208 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 U3KQV3 271 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 CGNL1Q0VF96 1302 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 BICRAQ9NZM4 1560 aa2.87□□□□□ -1.95
TRAV28-201ENST00000557548 SYNJ2BP-COX16A0A087WUM0 186 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 A0A087WZY1 265 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 A0A1W2PN81 502 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 TMEM89A2RUT3 159 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 WDR91A4D1P6 747 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 TMEM110-MUSTN1A8MSY1 372 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 C2CD4DB7Z1M9 353 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 H0YCG3 227 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 O00370 1275 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ADAM12O43184 909 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 LANCL1O43813 399 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 LRP3O75074 770 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PRKRAO75569 313 aaKnown RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PIGNO95427 931 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 CRYABP02511 175 aaKnown RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PROS1P07225 676 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ZCCHC18P0CG32 403 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 IGHV4-31P0DP07 118 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 KRT13P13646 458 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PRG2P13727 222 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 MSH3P20585 1137 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ALDH4A1P30038 563 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 CDC25AP30304 524 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 CCKBRP32239 447 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 CHRNA7P36544 502 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 OR3A3P47888 321 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PDLIM4P50479 330 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 GAS1P54826 345 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 SH3BGRP55822 239 aaPredicted RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 MAZP56270 477 aaKnown RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PITX1P78337 314 aaPredicted RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 CCZ1BP86790 482 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 CCZ1P86791 482 aaPredicted RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ZXDBP98169 803 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 GABPB1Q06547 395 aaPredicted RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 OVGP1Q12889 678 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 IFT88Q13099 833 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 DMP1Q13316 513 aaPredicted RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 MSLNQ13421 630 aaPredicted RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 SQLEQ14534 574 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 STX1AQ16623 288 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 MAJINQ3KP22 176 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 HSP90B2PQ58FF3 399 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 OR4C11Q6IEV9 310 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 KCTD8Q6ZWB6 473 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ANO5Q75V66 913 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 CPEB2Q7Z5Q1 589 aaKnown RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 C5orf24Q7Z6I8 188 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ADGRD2Q7Z7M1 963 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF573Q86YE8 665 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ZC3H3Q8IXZ2 948 aaKnown RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 SRRM1Q8IYB3 904 aaKnown RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF843Q8N446 348 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 RNF148Q8N7C7 305 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 DENND6BQ8NEG7 585 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 TRPV3Q8NET8 790 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ELP5Q8TE02 316 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 METTL21AQ8WXB1 218 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PIK3R3Q92569 461 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 FCGR1BQ92637 280 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 THRSPQ92748 146 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 VOPP1Q96AW1 172 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 SLC47A1Q96FL8 570 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 C4orf45Q96LM5 186 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 GUCD1Q96NT3 240 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 NECTIN4Q96NY8 510 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 BTBD9Q96Q07 612 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 COQ7Q99807 217 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PSD2Q9BQI7 771 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ERP44Q9BS26 406 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 UBAC1Q9BSL1 405 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 SHARPINQ9H0F6 387 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ATG10Q9H0Y0 220 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 TRPV6Q9H1D0 765 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ACTR8Q9H981 624 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 ROPN1Q9HAT0 212 aaPredicted RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PALMDQ9NP74 551 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 CNOT2Q9NZN8 540 aaKnown RBP2.86□□□□□ -1.95
TRAV28-201ENST00000557548 OR6C2Q9NZP2 312 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms