RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 REPS1Q96D71 796 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ATOH8Q96SQ7 321 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 MRPL57Q9BQC6 102 aaKnown RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 TMEM79Q9BSE2 394 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 SARGQ9BW04 601 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ROGDIQ9GZN7 287 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ING2Q9H160 280 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 MRPL46Q9H2W6 279 aaKnown RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 SOX17Q9H6I2 414 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 NT5DC2Q9H857 520 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 COPS7BQ9H9Q2 264 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 CLK4Q9HAZ1 481 aaKnown RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 C19orf25Q9UFG5 118 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-223ENST00000557511 TBK1Q9UHD2 729 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ADGRE2Q9UHX3 823 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 KCNMB2Q9Y691 235 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 SLC22A7Q9Y694 548 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 ASPMQ8IZT6 3477 aa7.91□□□□□ -1.14
PSEN1-223ENST00000557511 FREM2Q5SZK8 3169 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 TLDC2A0PJX2 215 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SERTM1A2A2V5 107 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SMIM23A6NLE4 172 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 TAPBPO15533 448 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 P2RX6O15547 441 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 CDH16O75309 829 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 KLHL18O94889 574 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 ALPPP05187 535 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 CAPN1P07384 714 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SERPINA6P08185 405 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 ZGLP1P0C6A0 271 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 FAM87AP0C7U9 286 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 PCNAP12004 261 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 IL1RNP18510 177 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 JAK1P23458 1154 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 MMP11P24347 488 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 HNF4AP41235 474 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 CCT5P48643 541 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 AP2B1P63010 937 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 NFKB2Q00653 900 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 IL10RAQ13651 578 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 ATP1A4Q13733 1029 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 COL9A2Q14055 689 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SETDB1Q15047 1291 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 C18orf21Q32NC0 220 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-223ENST00000557511 LINC00303Q3SY05 128 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 TUBB8Q3ZCM7 444 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 MINDY4Q4G0A6 757 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 FBXO48Q5FWF7 155 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 TECRLQ5HYJ1 363 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 TOR1AIP1Q5JTV8 583 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 RNFT1Q5M7Z0 435 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 WDR93Q6P2C0 686 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 MED27Q6P2C8 311 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 TRIM40Q6P9F5 258 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 EMBQ6PCB8 327 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 TIFABQ6ZNK6 161 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SLCO4C1Q6ZQN7 724 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SHISA6Q6ZSJ9 500 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 VN1R4Q7Z5H5 301 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 MRGPREQ86SM8 312 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 APLFQ8IW19 511 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-223ENST00000557511 PTGR2Q8N8N7 351 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-223ENST00000557511 CCDC63Q8NA47 563 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 OR9A4Q8NGU2 314 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 NT5CQ8TCD5 201 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 UBTD2Q8WUN7 234 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-223ENST00000557511 ISL2Q96A47 359 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 TM4SF19Q96DZ7 209 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 MAGEB10Q96LZ2 347 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-223ENST00000557511 C10orf90Q96M02 699 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SLC25A23Q9BV35 468 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 IQCGQ9H095 443 aaKnown RBP7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SLC25A18Q9H1K4 315 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 ANKZF1Q9H8Y5 726 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 ACTR8Q9H981 624 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 NEUROD4Q9HD90 331 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 P4HTMQ9NXG6 502 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 XPR1Q9UBH6 696 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 CTSFQ9UBX1 484 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 DCDC2Q9UHG0 476 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 C3orf18Q9UK00 162 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SH2B3Q9UQQ2 575 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 NAALAD2Q9Y3Q0 740 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 SPACA6W5XKT8 324 aa7.9□□□□□ -1.14
PSEN1-223ENST00000557511 HMX2A2RU54 273 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 STX16-NPEPL1H3BU86 382 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 SGK494L7N484 410 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 AGPSO00116 658 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 STX16O14662 325 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 GLRA3O75311 464 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 RDH16O75452 317 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 CLEC3AO75596 197 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 KLF7O75840 302 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-223ENST00000557511 GSTA1P08263 222 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 CYC1P08574 325 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 FURINP09958 794 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 ACPPP15309 386 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 ITGA3P26006 1051 aa7.89□□□□□ -1.15
PSEN1-223ENST00000557511 EEF1DP29692 281 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms