RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 LEF1Q9UJU2 399 aaPredicted RBP13.81□□□□□ -0.2
ARHGEF40-208ENST00000557498 ADAM29Q9UKF5 820 aa13.81□□□□□ -0.2
ARHGEF40-208ENST00000557498 MAPRE3Q9UPY8 281 aa13.81□□□□□ -0.2
ARHGEF40-208ENST00000557498 RRP15Q9Y3B9 282 aaKnown RBP13.81□□□□□ -0.2
ARHGEF40-208ENST00000557498 MDC1Q14676 2089 aaKnown RBP13.81□□□□□ -0.2
ARHGEF40-208ENST00000557498 GNG14A0A1W2PPG7 69 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 ASPDHA6ND91 283 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 SLC9B1P1A6NJY1 282 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 RTCAO00442 366 aaKnown RBP13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 CFLARO15519 480 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 B4GAT1O43505 415 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 EEDO75530 441 aaKnown RBP13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 KLHL18O94889 574 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 KRT16P08779 473 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 SLC35G6P0C7Q6 338 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 ZNF883P0CG24 379 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 NQO1P15559 274 aaKnown RBP13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 PRPS1L1P21108 318 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 TPP2P29144 1249 aaPredicted RBP13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 CORO7P57737 925 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 STXBP1P61764 594 aaKnown RBP13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 SLC25A3Q00325 362 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 TGM3Q08188 693 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 HKDC1Q2TB90 917 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 SPANXN4Q5MJ08 99 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 GUSBP11Q6P575 273 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 C16orf89Q6UX73 402 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 RIPOR1Q6ZS17 1223 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 SPRED1Q7Z699 444 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 RETREG3Q86VR2 466 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 RIMKLAQ8IXN7 391 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 CARFQ8N187 725 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 Q8N9G6 341 aaPredicted RBP13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 PCYOX1LQ8NBM8 494 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 CAMKVQ8NCB2 501 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 OR2L5Q8NG80 312 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 CDC26Q8NHZ8 85 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 C16orf78Q8WTQ4 265 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 STARD8Q92502 1023 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 RERGQ96A58 199 aaPredicted RBP13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 VPS33AQ96AX1 596 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 TESCQ96BS2 214 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 EGLN2Q96KS0 407 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 MACROD1Q9BQ69 325 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 COL25A1Q9BXS0 654 aaPredicted RBP13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 ZMYND15Q9H091 742 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 MYNNQ9NPC7 610 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 LHX9Q9NQ69 397 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 NDE1Q9NXR1 346 aa13.8□□□□□ -0.2
ARHGEF40-208ENST00000557498 SDK1Q7Z5N4 2213 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 ARHGAP10A1A4S6 786 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 EME2A4GXA9 379 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 C4orf51C9J302 202 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 H0YGG7 62 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 GSC2O15499 205 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 P2RX6O15547 441 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 ERI3O43414 337 aaKnown RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 SH3BP5O60239 455 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 LRATO95237 230 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 C9P02748 559 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 GBAP04062 536 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 IL6P05231 212 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 CSF2RBP32927 897 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 HPCAL1P37235 193 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 SSR2P43308 183 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 GSTM5P46439 218 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 DGKQP52824 942 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 PLA2G16P53816 162 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 ATXN3P54252 364 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 ARF3P61204 181 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 TLR1Q15399 786 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 FAM174BQ3ZCQ3 159 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 AMZ1Q400G9 498 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 ZC3H12BQ5HYM0 836 aaKnown RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 PERM1Q5SV97 790 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 CCNYL2Q5T2Q4 361 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 OR4C11Q6IEV9 310 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 FRMPD2BQ6IN97 320 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 TRIM40Q6P9F5 258 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 ABHD17CQ6PCB6 329 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 HACD2Q6Y1H2 254 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 IKBIPQ70UQ0 350 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 PLXDC1Q8IUK5 500 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 DSELQ8IZU8 1212 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 PGAM4Q8N0Y7 254 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 SRFBP1Q8NEF9 429 aaKnown RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 NUDT8Q8WV74 236 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 NAT6Q93015 286 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 GAL3ST3Q96A11 431 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 TCTN2Q96GX1 697 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 KCNC2Q96PR1 638 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 RAB3IPQ96QF0 476 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 C17orf62Q9BQA9 187 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 CADM1Q9BY67 442 aaKnown RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 DDX31Q9H8H2 851 aaKnown RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 FAM60AQ9NP50 221 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 PCDHGB2Q9Y5G2 931 aa13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 MN1Q10571 1320 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF40-208ENST00000557498 NCOR1O75376 2440 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms