RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SLCO4C1Q6ZQN7 724 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 UTP15Q8TED0 518 aaKnown RBP17.02■□□□□ 0.31
XRCC3-218ENST00000557439 GLYATL1Q969I3 302 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 PPP1R14BQ96C90 147 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 TCF25Q9BQ70 676 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 SLC35A5Q9BS91 424 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 COPS4Q9BT78 406 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 DOHHQ9BU89 302 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 RNF208Q9H0X6 261 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 ADPRHL2Q9NX46 363 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 GPR83Q9NYM4 423 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 PRKAB1Q9Y478 270 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 KIAA1671Q9BY89 1806 aa17.02■□□□□ 0.31
XRCC3-218ENST00000557439 PLXNA2O75051 1894 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 SLC5A10A0PJK1 596 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 SERTM1A2A2V5 107 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 KPNA5O15131 536 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 CYP2A6P11509 494 aaPredicted RBP17.01■□□□□ 0.31
XRCC3-218ENST00000557439 PORP16435 677 aaPredicted RBP17.01■□□□□ 0.31
XRCC3-218ENST00000557439 HNF4AP41235 474 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 SPIBQ01892 262 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 KCNC4Q03721 635 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 PPIGQ13427 754 aaKnown RBP eCLIP17.01■□□□□ 0.312e-9■□□□□ 9.2
XRCC3-218ENST00000557439 EXOC3L2Q2M3D2 409 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 PROX2Q3B8N5 592 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 ZDHHC20Q5W0Z9 365 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 BRAT1Q6PJG6 821 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 COMMD6Q7Z4G1 85 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 DSG4Q86SJ6 1040 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 TRIM73Q86UV7 250 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 P3H2Q8IVL5 708 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 TRAM1L1Q8N609 369 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 MRGPRX3Q96LB0 322 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 ZSWIM3Q96MP5 696 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 IL17FQ96PD4 163 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 ZBP1Q9H171 429 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 EPS8L2Q9H6S3 715 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 PLAGL1Q9UM63 463 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 HIDE1A8MVS5 230 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 UGDHO60701 494 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 ATG13O75143 517 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 SERPINB7O75635 380 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 ELFN1P0C7U0 828 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 CXCR4P61073 352 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 OXA1LQ15070 435 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 DGUOKQ16854 277 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 NIPAL1Q6NVV3 410 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 PRSS48Q7RTY5 328 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 C11orf65Q8NCR3 313 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 VN1R2Q8NFZ6 395 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 OR10G2Q8NGC3 310 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 OR6Q1Q8NGQ2 317 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 PITX2Q99697 317 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 ACAT2Q9BWD1 397 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 CEP44Q9C0F1 390 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 SLIRPQ9GZT3 109 aaKnown RBP17.01■□□□□ 0.31
XRCC3-218ENST00000557439 SPHK2Q9NRA0 654 aa17.01■□□□□ 0.31
XRCC3-218ENST00000557439 EFCAB9A8MZ26 197 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 M0R082 166 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 ZNF30P17039 623 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 SELENOWP63302 87 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 LILRA6Q6PI73 481 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 NEK10Q6ZWH5 1172 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 RNF130Q86XS8 419 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 VPS37AQ8NEZ2 397 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 OR56A3Q8NH54 315 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 ING5Q8WYH8 240 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 GTPBP3Q969Y2 492 aaKnown RBP17■□□□□ 0.31
XRCC3-218ENST00000557439 HRASLS5Q96KN8 279 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 CCM2Q9BSQ5 444 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 NECTIN3Q9NQS3 549 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 INIPQ9NRY2 104 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 SPASTQ9UBP0 616 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 BTNL2Q9UIR0 455 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 B3GNT3Q9Y2A9 372 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 H3BM21 787 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 KPNA3O00505 521 aaPredicted RBP17■□□□□ 0.31
XRCC3-218ENST00000557439 PCDH17O14917 1159 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 MOSPD3O75425 235 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 DNAJB5O75953 348 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 KLHL18O94889 574 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 NPPBP16860 134 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 SYN1P17600 705 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 POLR2EP19388 210 aaKnown RBP17■□□□□ 0.31
XRCC3-218ENST00000557439 GADD45AP24522 165 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 SOAT1P35610 550 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 RPS26P62854 115 aaKnown RBP17■□□□□ 0.31
XRCC3-218ENST00000557439 ZNF697Q5TEC3 545 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 MED27Q6P2C8 311 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 LIPIQ6XZB0 460 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 TECPR1Q7Z6L1 1165 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 PLD3Q8IV08 490 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 COQ8BQ96D53 544 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 ZHX1-C8orf76Q96EF9 292 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 HHIPL1Q96JK4 782 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 SIGLEC11Q96RL6 698 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 ZSCAN5AQ9BUG6 496 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 OR2AG1Q9H205 316 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 TMEM39AQ9NV64 488 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 PCDHGB3Q9Y5G1 929 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms