RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 REEP5Q00765 189 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 NKG7Q16617 165 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 CCNYL2Q5T2Q4 361 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 KHDRBS2Q5VWX1 349 aaKnown RBP17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 Q6ZSR6 202 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 GALNT10Q86SR1 603 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 TMEM145Q8NBT3 493 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 OR4E2Q8NGC2 313 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 OR4A15Q8NGL6 344 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 OR2L8Q8NGY9 312 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 STARD8Q92502 1023 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 COQ8BQ96D53 544 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 CENPNQ96H22 339 aaPredicted RBP17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 VPS50Q96JG6 964 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 TRAPPC9Q96Q05 1148 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 NR1H4Q96RI1 486 aaPredicted RBP17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 MVB12BQ9H7P6 319 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 MAGEA13PA6NCF6 341 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 KCNJ13O60928 360 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 CREG1O75629 220 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 CXCR2P25025 360 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 TPP2P29144 1249 aaPredicted RBP17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 AKT2P31751 481 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 C16orf72Q14CZ0 275 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 ZNF542PQ5EBM4 170 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 DEPDC1Q5TB30 811 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 DENND6BQ8NEG7 585 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 VPS37AQ8NEZ2 397 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 TOE1Q96GM8 510 aaKnown RBP17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 MS4A8Q9BY19 250 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 RHBGQ9H310 441 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 PCDHB11Q9Y5F2 797 aa17.52■□□□□ 0.4
SDR39U1-220ENST00000556548 PPM1DO15297 605 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 PRKD3O94806 890 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 SERPINA1P01009 418 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 FURINP09958 794 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 GLULP15104 373 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 PEBP1P30086 187 aaKnown RBP17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 CCT8P50990 548 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 ABHD18Q0P651 414 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 GAB1Q13480 694 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 LRIT3Q3SXY7 679 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 C1QTNF12Q5T7M4 302 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 FAM71E1Q6IPT2 247 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 FBXL6Q8N531 539 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 PAPD5Q8NDF8 572 aaKnown RBP17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 OR13H1Q8NG92 308 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 RLN3Q8WXF3 142 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 PPCDCQ96CD2 204 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 TPT1P8Q9HAU6 139 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 MRPS30Q9NP92 439 aaKnown RBP17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 UBAP1Q9NZ09 502 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 RAB26Q9ULW5 256 aa17.52■□□□□ 0.39
SDR39U1-220ENST00000556548 RNF103-CHMP3A0A140T963 221 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 C6orf47O95873 294 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 HOXC4P09017 264 aaPredicted RBP17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 SRFP11831 508 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 SRP54P61011 504 aaKnown RBP17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 CHRNB3Q05901 458 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 TDGQ13569 410 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 MPEG1Q2M385 716 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 ALG11Q2TAA5 492 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 FAM98BQ52LJ0 330 aaKnown RBP17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 ANGPTL8Q6UXH0 198 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 FAM160A2Q8N612 972 aaPredicted RBP17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 REXO5Q96IC2 774 aaKnown RBP17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 POLMQ9NP87 494 aaPredicted RBP17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 SIRT5Q9NXA8 310 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 ZNF624Q9P2J8 865 aaPredicted RBP17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 ATP6V1HQ9UI12 483 aa17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 CNOT11Q9UKZ1 510 aaKnown RBP17.51■□□□□ 0.39
SDR39U1-220ENST00000556548 SOX1O00570 391 aaPredicted RBP17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 SCELO95171 688 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 APBB3O95704 486 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 LDLRP01130 860 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 IGHV4-34P06331 123 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 FCGR1AP12314 374 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 PLA2G16P53816 162 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 HBA1P69905 142 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 COL9A2Q14055 689 aaPredicted RBP17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 ANXA8L1Q5VT79 327 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 ZNF852Q6ZMS4 543 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 CAMKMTQ7Z624 323 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 ZNF597Q96LX8 424 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 GPR174Q9BXC1 333 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 ZNF717Q9BY31 904 aaPredicted RBP17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 ABCG4Q9H172 646 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 SLC6A20Q9NP91 592 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 MYNNQ9NPC7 610 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 USP36Q9P275 1121 aaKnown RBP17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 SCOCQ9UIL1 159 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 BTNL2Q9UIR0 455 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 AP3M1Q9Y2T2 418 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 TSC22D4Q9Y3Q8 395 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 COLEC10Q9Y6Z7 277 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 VCANP13611 3396 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 GOLGA4Q13439 2230 aaKnown RBP17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 ISM1B1AKI9 464 aa17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 DENRO43583 198 aaKnown RBP17.5■□□□□ 0.39
SDR39U1-220ENST00000556548 NUDT7P0C024 238 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms