RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ARHGDIAP52565 204 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 PGGT1BP53609 377 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 TMBIM6P55061 237 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 MANFP55145 182 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CDH15P55291 814 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SIGLEC14Q08ET2 396 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SLC10A7Q0GE19 358 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SMARCB1Q12824 385 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 BTG3Q14201 252 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 GRB7Q14451 532 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF846Q147U1 533 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RAB39AQ14964 217 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 OR4D1Q15615 310 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 TSNQ15631 228 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 NEDD8Q15843 81 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RGS21Q2M5E4 152 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RFX4Q33E94 735 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CTXN3Q4LDR2 81 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF789Q5FWF6 425 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 NHSL2Q5HYW2 709 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 PITRM1Q5JRX3 1037 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 GPR107Q5VW38 600 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 LYPLAL1Q5VWZ2 237 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 IL27RAQ6UWB1 636 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RPS27LQ71UM5 84 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 TAS2R42Q7RTR8 314 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 MRPL10Q7Z7H8 261 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 C14orf80Q86SX3 495 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ISCA2Q86U28 154 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 LDB1Q86U70 411 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ZFAND4Q86XD8 727 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 EPHX4Q8IUS5 362 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SLC15A3Q8IY34 581 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CMTR2Q8IYT2 770 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 OFCC1Q8IZS5 231 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 LGI2Q8N0V4 545 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SFRP1Q8N474 314 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CARNMT1Q8N4J0 409 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 MINDY2Q8NBR6 621 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 LPCAT1Q8NF37 534 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 OR8J3Q8NGG0 315 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 OR10T2Q8NGX3 314 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 HMGCLL1Q8TB92 370 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 DNAJB14Q8TBM8 379 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 PHOSPHO2Q8TCD6 241 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 KCNJ9Q92806 393 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ITFG2Q969R8 447 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 PTERQ96BW5 349 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ULK4Q96C45 1275 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 C12orf43Q96C57 262 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SLC47A1Q96FL8 570 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 FBXL20Q96IG2 436 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 CNDP2Q96KP4 475 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 TBATAQ96M53 351 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ATOH8Q96SQ7 321 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF382Q96SR6 550 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SEPHS2Q99611 448 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SEPT5Q99719 369 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 EGFL8Q99944 293 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RBM4BQ9BQ04 359 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RTP3Q9BQQ7 232 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RBM4Q9BWF3 364 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 NPLQ9BXD5 320 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SEZ6LQ9BYH1 1024 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ASPSCR1Q9BZE9 553 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 DPY30Q9C005 99 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 BRINP2Q9C0B6 783 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 MAGEH1Q9H213 219 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ADNPQ9H2P0 1102 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RAD21L1Q9H4I0 556 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 RMND5AQ9H871 391 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SYNPO2LQ9H987 977 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 NMUR1Q9HB89 426 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 HMG20AQ9NP66 347 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SARS2Q9NP81 518 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 TMLHEQ9NVH6 421 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 FAIMQ9NVQ4 179 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 NLE1Q9NVX2 485 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 THG1LQ9NWX6 298 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 WWOXQ9NZC7 414 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 H2AFY2Q9P0M6 372 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 KIF17Q9P2E2 1029 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 MARCH4Q9P2E8 410 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 WARS2Q9UGM6 360 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 GNPTGQ9UJJ9 305 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 C3orf18Q9UK00 162 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 BAG5Q9UL15 447 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 PAIP2BQ9ULR5 123 aaKnown RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 POLR3HQ9Y535 204 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 ARL5AQ9Y689 179 aa4.27□□□□□ -1.73
ATXN3-241ENST00000556374 TRIP12Q14669 1992 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-241ENST00000556374 SCN10AQ9Y5Y9 1956 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 IGLV3-10A0A075B6K4 115 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TRIM64CA6NLI5 447 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 MARCH11A6NNE9 402 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 G3V2T6 193 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 H3BMQ9 156 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 H7C4K7 107 aa4.26□□□□□ -1.73
ATXN3-241ENST00000556374 TMEM189-UBE2V1I3L0A0 370 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms