RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 POLR3HQ9Y535 204 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-220ENST00000555634 GPR179Q6PRD1 2367 aa10.69□□□□□ -0.7
SHMT2-220ENST00000555634 COL27A1Q8IZC6 1860 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 B3GALT2O43825 422 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 PRAMEF4O60810 478 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 JMJD7P0C870 316 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 PRPS2P11908 318 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 TIA1P31483 386 aaKnown RBP eCLIP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 AVPR1BP47901 424 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 LSSP48449 732 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 NOVA1P51513 510 aaKnown RBP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 MAPK12P53778 367 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 CLNS1AP54105 237 aaKnown RBP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 EMP3P54852 163 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 YBX1P67809 324 aaKnown RBP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 SIM1P81133 766 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 ZNF763Q0D2J5 394 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 SF3A3Q12874 501 aaKnown RBP eCLIP10.68□□□□□ -0.76e-8■■□□□ 12.4
SHMT2-220ENST00000555634 SQLEQ14534 574 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 IL11RAQ14626 422 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 MAPRE2Q15555 327 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 LSM12Q3MHD2 195 aaKnown RBP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 PRAMEF9Q5VWM5 478 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 CGB2Q6NT52 195 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 PPP1R3BQ86XI6 285 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 TMEM126BQ8IUX1 230 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 SLITRK4Q8IW52 837 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 CDC26Q8NHZ8 85 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 ZCCHC10Q8TBK6 192 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 ADAMTS18Q8TE60 1221 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 PPM1MQ96MI6 270 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 C17orf62Q9BQA9 187 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 TBCDQ9BTW9 1192 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 FAIM2Q9BWQ8 316 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 MRPL1Q9BYD6 325 aaKnown RBP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 SLC6A16Q9GZN6 736 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 OR51B5Q9H339 312 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 TUBB1Q9H4B7 451 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 WDR55Q9H6Y2 383 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 AKTIPQ9H8T0 292 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 LYARQ9NX58 379 aaKnown RBP10.68□□□□□ -0.7
SHMT2-220ENST00000555634 TMEM9Q9P0T7 183 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 SEMA5BQ9P283 1151 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 PDP2Q9P2J9 529 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 PHF11Q9UIL8 331 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 CDC14AQ9UNH5 594 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 CLCA2Q9UQC9 943 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 PTGDR2Q9Y5Y4 395 aa10.68□□□□□ -0.7
SHMT2-220ENST00000555634 FRYLO94915 3013 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 LRIT2A6NDA9 550 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 NPIPB8E9PQR5 432 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 SLC30A4O14863 429 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 POLR1CO15160 346 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 CSO75390 466 aaKnown RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 JUNP05412 331 aaKnown RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 FTH1P19P0C7X4 201 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 ZNF888P0CJ79 500 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 ALOX12P18054 663 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 BUD31P41223 144 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 PLA2G16P53816 162 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 MTTPP55157 894 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 EMX2Q04743 252 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 SLC9A5Q14940 896 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 GPR19Q15760 415 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 C6orf136Q5SQH8 315 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 WASHC2DQ5SRD0 308 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 CCNYL2Q5T2Q4 361 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 DEPDC1Q5TB30 811 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 HES3Q5TGS1 186 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 TMEM164Q5U3C3 297 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 FRMPD2BQ6IN97 320 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 CEACAM20Q6UY09 585 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 IKBIPQ70UQ0 350 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 COMMD6Q7Z4G1 85 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 ARHGAP22Q7Z5H3 698 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 PIGWQ7Z7B1 504 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 MIER2Q8N344 545 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 GALNT15Q8N3T1 639 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 DNAJC22Q8N4W6 341 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 C1orf52Q8N6N3 182 aaKnown RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 RCBTB1Q8NDN9 531 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 MS4A6EQ96DS6 147 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 MVB12AQ96EY5 273 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 TEFMQ96QE5 360 aaKnown RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 OR6C1Q96RD1 312 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 SERINC2Q96SA4 455 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 PRPF18Q99633 342 aaKnown RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 EBF4Q9BQW3 602 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 C1orf50Q9BV19 199 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 WDR41Q9HAD4 459 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 ASIC5Q9NY37 505 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 HEY2Q9UBP5 337 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 NDOR1Q9UHB4 597 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 MCM8Q9UJA3 840 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 MRPS33Q9Y291 106 aaKnown RBP10.67□□□□□ -0.7
SHMT2-220ENST00000555634 SLC22A7Q9Y694 548 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 CAPN7Q9Y6W3 813 aa10.67□□□□□ -0.7
SHMT2-220ENST00000555634 CCDC187A0A096LP49 1063 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 HYKKA2RU49 373 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms