RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 LRIT2A6NDA9 550 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 TLCD2A6NGC4 264 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 BBIP1A8MTZ0 92 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 H0YGG7 62 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 PLPP1O14494 284 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 MRASO14807 208 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 ANKRD28O15084 1053 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 MAP3K7O43318 606 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 ERI3O43414 337 aaKnown RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 KIF1CO43896 1103 aaKnown RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 PCDHGA12O60330 932 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 RASSF9O75901 435 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 DNAJC8O75937 253 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 TBX6O95947 436 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 GBAP04062 536 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 PNLIPP16233 465 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 JAK1P23458 1154 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 TACR1P25103 407 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 HNRNPH1P31943 449 aaKnown RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 MLLT3P42568 568 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 SSR2P43308 183 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 ASMTP46597 345 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 ARL4DP49703 201 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 NUDT2P50583 147 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 DUSP3P51452 185 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 PLA2G16P53816 162 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 CLNS1AP54105 237 aaKnown RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 VSX2P58304 361 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 ARF3P61204 181 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 GPLD1P80108 840 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 SLC25A3Q00325 362 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 RELAQ04206 551 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 ACTN3Q08043 901 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 TGM3Q08188 693 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 NR1D2Q14995 579 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 HKDC1Q2TB90 917 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 PGS1Q32NB8 556 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 INAVAQ3KP66 663 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 VPS26BQ4G0F5 336 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 ZC3H12BQ5HYM0 836 aaKnown RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 SNAP47Q5SQN1 464 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 CCNYL2Q5T2Q4 361 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 OR4C11Q6IEV9 310 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 FRMPD2BQ6IN97 320 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 TRIM40Q6P9F5 258 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 USP53Q70EK8 1073 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 RNF44Q7L0R7 432 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 VN1R4Q7Z5H5 301 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 SPRED1Q7Z699 444 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 NUDT13Q86X67 352 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 PLXDC1Q8IUK5 500 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 KRTCAP2Q8N6L1 136 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 ZNF655Q8N720 491 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 FAM181AQ8N9Y4 354 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 PCYOX1LQ8NBM8 494 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 CAMKVQ8NCB2 501 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 GLB1L3Q8NCI6 653 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 RBM15BQ8NDT2 890 aaKnown RBP9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 NT5CQ8TCD5 201 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 C16orf78Q8WTQ4 265 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 NUDT8Q8WV74 236 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 EGLN2Q96KS0 407 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 OR2A5Q96R48 311 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 CD180Q99467 661 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 CCDC3Q9BQI4 270 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 NLNQ9BYT8 704 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 LRMDAQ9H2I8 198 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 ACTL8Q9H568 366 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 SYNDIG1Q9H7V2 258 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 SIRT5Q9NXA8 310 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 TAS2R1Q9NYW7 299 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 EPHA6Q9UF33 1036 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 MCM8Q9UJA3 840 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 PILRAQ9UKJ1 303 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 NDUFAF1Q9Y375 327 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 CACNA1EQ15878 2313 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 KNL1Q8NG31 2342 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 RALGAPA1Q6GYQ0 2036 aa9.21□□□□□ -0.94
HNRNPC-220ENST00000555585 LOC105369274A0A096LPK9 316 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 LY6G6EA0A0G2JKS1 128 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 LOC102723532A0A0G2JNH3 316 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 URADA6NGE7 173 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 FBP2O00757 339 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 CFLARO15519 480 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 PRMT3O60678 531 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 EEDO75530 441 aaKnown RBP9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 RETP07949 1114 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 KRT16P08779 473 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 COX7A2P14406 83 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 ITGAXP20702 1163 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 CAPN3P20807 821 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 PRPS1L1P21108 318 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 CD1CP29017 333 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 S100A3P33764 101 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 BSGP35613 385 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 HPCAL1P37235 193 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 ZFP36L2P47974 494 aaKnown RBP9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 DGKQP52824 942 aa9.2□□□□□ -0.94
HNRNPC-220ENST00000555585 RAB8AP61006 207 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms