RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	SUSD6	Q92537	303 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	ZNF560	Q96MR9	790 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	EPYC	Q99645	322 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	DPEP2	Q9H4A9	486 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	ATP13A3	Q9H7F0	1226 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	RPH3A	Q9Y2J0	694 aa	Predicted RBP	3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	DHX29	Q7Z478	1369 aa	Known RBP	3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	DOCK7	Q96N67	2140 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506	STK36	Q9NRP7	1315 aa		3.87	□□□□□ -1.79
KTN1-222	ENST00000555506		A0A087WUV0	522 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	RNF103-CHMP3	A0A140T963	221 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	C2orf92	A0A1B0GVN3	265 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	KRT87P	A6NCN2	255 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	MSGN1	A6NI15	193 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506		A8MVM7	634 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	C19orf81	C9J6K1	198 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	RNF103	O00237	685 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	EML2	O95834	649 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	GAS8	O95995	478 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	MT-ND2	P03891	347 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	VTN	P04004	478 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC2A2	P11168	524 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	FER	P16591	822 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	IL10	P22301	178 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	CLCN4	P51793	760 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	LINC01547	P58512	204 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	TSTA3	Q13630	321 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SMC1A	Q14683	1233 aa	Known RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	ZNF74	Q16587	644 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	STPG1	Q5TH74	334 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	ZNF790	Q6PG37	636 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	B3GLCT	Q6Y288	498 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	C15orf52	Q6ZUT6	534 aa	Known RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	MIER3	Q7Z3K6	550 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	C5orf24	Q7Z6I8	188 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	ZNF444	Q8N0Y2	327 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	GPRC5A	Q8NFJ5	357 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SEPT8	Q92599	483 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	ULK4	Q96C45	1275 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SPATA13	Q96N96	652 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	RUNDC3B	Q96NL0	473 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	TEX13A	Q9BXU3	409 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	LRRC2	Q9BYS8	371 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC52A3	Q9NQ40	469 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	ZCCHC3	Q9NUD5	404 aa	Known RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	STRAP	Q9Y3F4	350 aa	Known RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	C2CD2	Q9Y426	696 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	NPHP3	Q7Z494	1330 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	TRBV4-1	A0A0J9YWV2	114 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	CCDC162P	A2VCL2	907 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC15A5	A6NIM6	579 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	PCDH7	O60245	1069 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	CYTIP	O60759	359 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	TRMU	O75648	421 aa	Known RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	CDC123	O75794	336 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SEC24A	O95486	1093 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	CXCL14	O95715	111 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	MMP10	P09238	476 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	PC	P11498	1178 aa	Known RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	UGT1A6	P19224	532 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	AHCY	P23526	432 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	MAPK3	P27361	379 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	TIMP3	P35625	211 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	CDKN1A	P38936	164 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	DCDC1	P59894	354 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	GALK2	Q01415	458 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	CDH18	Q13634	790 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	ITGA9	Q13797	1035 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	TEAD2	Q15562	447 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SLC27A4	Q6P1M0	643 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	CD164L2	Q6UWJ8	174 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	MACC1	Q6ZN28	852 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	ZC3H3	Q8IXZ2	948 aa	Known RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	RNF149	Q8NC42	400 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	EXOC6	Q8TAG9	804 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	HAS2	Q92819	552 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	DTD2	Q96FN9	168 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	UHRF2	Q96PU4	802 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	NEDD4L	Q96PU5	975 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	NKX3-1	Q99801	234 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	FAM213A	Q9BRX8	229 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	WWTR1	Q9GZV5	400 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	C1orf21	Q9H246	121 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	TMEM245	Q9H330	911 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	ZNF71	Q9NQZ8	489 aa	Predicted RBP	3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	TRIM10	Q9UDY6	481 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	UBQLN2	Q9UHD9	624 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	TSPAN16	Q9UKR8	245 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	SATB2	Q9UPW6	733 aa		3.86	□□□□□ -1.79
KTN1-222	ENST00000555506	EME2	A4GXA9	379 aa	Predicted RBP	3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	CYSRT1	A8MQ03	144 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	PMS2P5	A8MQ11	134 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	ZNF732	B4DXR9	585 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	BLOC1S5-TXNDC5	H3BN57	136 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	TLR4	O00206	839 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	SAP30	O75446	220 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	AP2A2	O94973	939 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	IGLV2-11	P01706	119 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	ALPP	P05187	535 aa		3.85	□□□□□ -1.79

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