RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NELL1Q92832 810 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 KISS1RQ969F8 398 aaPredicted RBP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 MOAP1Q96BY2 351 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 KCNC2Q96PR1 638 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ZSCAN5AQ9BUG6 496 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 PRR14Q9BWN1 585 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 BARHL1Q9BZE3 327 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 SRRQ9GZT4 340 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 SEMA6CQ9H3T2 930 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 UCK1Q9HA47 277 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 QPCTLQ9NXS2 382 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 GALNT8Q9NY28 637 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 EMC3Q9P0I2 261 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 PLEKHB1Q9UF11 243 aaPredicted RBP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 C3orf18Q9UK00 162 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 RBMX2Q9Y388 322 aaKnown RBP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 TESMINQ9Y4I5 508 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 INSL5Q9Y5Q6 135 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 NCKAP5O14513 1909 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 CCDC182A6NF36 153 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF670-ZNF695F2Z2N8 137 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 NPIPB9F8W1W9 429 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 G3V3Q6 166 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 CASC3O15234 703 aaKnown RBP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 TLR5O60602 858 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 E2F6O75461 281 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ETHE1O95571 254 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 IL1AP01583 271 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 CLPSP04118 112 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 CAPN1P07384 714 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 HNRNPA1P09651 372 aaKnown RBP eCLIP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ADORA3P0DMS8 318 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ETS2P15036 469 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 TIMP2P16035 220 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 NPPBP16860 134 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 RHCEP18577 417 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 NCF2P19878 526 aaPredicted RBP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 MTHFRP42898 656 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 KCNJ5P48544 419 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 SLC11A2P49281 568 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 PGGT1BP53609 377 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 RABGGTBP53611 331 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 NPRL3Q12980 569 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 PPIGQ13427 754 aaKnown RBP eCLIP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 VEPH1Q14D04 833 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 TOMM20Q15388 145 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 LRIT3Q3SXY7 679 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 PRAMEF19Q5SWL8 479 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 FNDC7Q5VTL7 733 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF425Q6IV72 752 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 PDE12Q6L8Q7 609 aaKnown RBP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 C22orf39Q6P5X5 142 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 CAPN12Q6ZSI9 719 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM26Q6ZUK4 368 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 USP43Q70EL4 1123 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 TRAPPC5Q8IUR0 188 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF547Q8IVP9 402 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 HDDC3Q8N4P3 179 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 SVOPQ8N4V2 548 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 OR2T12Q8NG77 320 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 OR6F1Q8NGZ6 308 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 OR2L2Q8NH16 312 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 DNASE1L2Q92874 299 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 TAMM41Q96BW9 452 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ITPAQ9BY32 194 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 MIXL1Q9H2W2 232 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 RAD21L1Q9H4I0 556 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ACTR8Q9H981 624 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 MOV10Q9HCE1 1003 aaKnown RBP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 MYOZ1Q9NP98 299 aaPredicted RBP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ASB6Q9NWX5 421 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 STOX2Q9P2F5 926 aaPredicted RBP3.3□□□□□ -1.88
SEC23A-207ENST00000554615 RNF112Q9ULX5 631 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 BTBD3Q9Y2F9 522 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 IFT52Q9Y366 437 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ACTL7AQ9Y615 435 aa3.3□□□□□ -1.88
SEC23A-207ENST00000554615 ABHD14A-ACY1A0A1B0GW23 586 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 C7orf66A4D0T2 115 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TUBAL3A6NHL2 446 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 CLDN25C9JDP6 229 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 VEGFDO43915 354 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 RNGTTO60942 597 aaKnown RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 GPX5O75715 221 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 LINC00032P0C843 101 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ANXA8P13928 327 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ATP1B2P14415 290 aaPredicted RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF7P17097 686 aaPredicted RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ELK4P28324 431 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 BTCP35070 178 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 AVPR1AP37288 418 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ADH7P40394 386 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 MLLT3P42568 568 aaPredicted RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 PSPHP78330 225 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 COX10Q12887 443 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 LMAN2Q12907 356 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF239Q16600 458 aaKnown RBP3.29□□□□□ -1.88
SEC23A-207ENST00000554615 WSCD2Q2TBF2 565 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 TIMM50Q3ZCQ8 353 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 YIF1BQ5BJH7 314 aa3.29□□□□□ -1.88
SEC23A-207ENST00000554615 EOGTQ5NDL2 527 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms