RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SLC22A12Q96S37 553 aa16.32■□□□□ 0.2
PPP4R3A-202ENST00000554390 MTERF1Q99551 399 aaKnown RBP16.32■□□□□ 0.2
PPP4R3A-202ENST00000554390 MGLLQ99685 303 aa16.32■□□□□ 0.2
PPP4R3A-202ENST00000554390 TMPRSS11EQ9UL52 423 aa16.32■□□□□ 0.2
PPP4R3A-202ENST00000554390 H3BM21 787 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 SHOXO15266 292 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 IGLV3-27P01718 113 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 ESR1P03372 595 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 SEMG1P04279 462 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 POLR2CP19387 275 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 CCND3P30281 292 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 ATP5C1P36542 298 aaKnown RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 PTGER3P43115 390 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 OR1E2P47887 323 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 CHRNA6Q15825 494 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 PTCHD3Q3KNS1 767 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 TIMM50Q3ZCQ8 353 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 ESCO2Q56NI9 601 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 RDH10Q8IZV5 341 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 VWA5B2Q8N398 1253 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 ASPNQ9BXN1 380 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 FAM126AQ9BYI3 521 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 C11orf54Q9H0W9 315 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 IL26Q9NPH9 171 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 CRLS1Q9UJA2 301 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 TRPM7Q96QT4 1865 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 TET1Q8NFU7 2136 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 PLXNA4Q9HCM2 1894 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 GAPDHSO14556 408 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 KDELR3O43731 214 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 DUSP11O75319 330 aaKnown RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 GBAP04062 536 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 ALPPP05187 535 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 EPB42P16452 691 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 PCBP2Q15366 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 USP39Q53GS9 565 aaKnown RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 TJAP1Q5JTD0 557 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 AMIGO1Q86WK6 493 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 RNF130Q86XS8 419 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 PLCZ1Q86YW0 608 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 VANGL1Q8TAA9 524 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 CRELD1Q96HD1 420 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 TMEM121BQ9BXQ6 578 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 ADGRE3Q9BY15 652 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 CD244Q9BZW8 370 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 MAGEH1Q9H213 219 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 NMRK2Q9NPI5 230 aa16.31■□□□□ 0.2
PPP4R3A-202ENST00000554390 YY2O15391 372 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 CA12O43570 354 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 CYP2A6P11509 494 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 EPORP19235 508 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 PTPN6P29350 595 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 GZMKP49863 264 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 AP2S1P53680 142 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 ITGA1P56199 1179 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 HOXC5Q00444 222 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 BOP1Q14137 746 aaKnown RBP16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 BTBD16Q32M84 506 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 VRK3Q8IV63 474 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 RNF121Q9H920 327 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 LEUTXA8MZ59 168 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 PRAMEF4O60810 478 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 TBL1XO60907 577 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 FHP07954 510 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 SLC10A3P09131 477 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 SDC1P18827 310 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 KDELR2P33947 212 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 TGM4P49221 684 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 DOC2BQ14184 412 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 PRAMEF9Q5VWM5 478 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 ZNF367Q7RTV3 350 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 SLC51BQ86UW2 128 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 TCTE3Q8IZS6 198 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 FATE1Q969F0 183 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 PANX1Q96RD7 426 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 TTLL2Q9BWV7 592 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 DIABLOQ9NR28 239 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 ZNF226Q9NYT6 803 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 RPS6KA6Q9UK32 745 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 CLEC4EQ9ULY5 219 aa16.3■□□□□ 0.2
PPP4R3A-202ENST00000554390 SLC38A8A6NNN8 435 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 ADRA2AP08913 450 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 SMARCB1Q12824 385 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 ASAH1Q13510 395 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 DMC1Q14565 340 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 SSX1Q16384 188 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 ZNF648Q5T619 568 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 CXorf57Q6NSI4 855 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 C19orf48Q6RUI8 117 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 LIX1LQ8IVB5 337 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 APCDD1Q8J025 514 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 ZNF557Q8N988 423 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 SLC22A14Q9Y267 594 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 STC2O76061 302 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 ENGP17813 658 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 SLC11A2P49281 568 aa16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 TSTA3Q13630 321 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 COL9A2Q14055 689 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-202ENST00000554390 UTP15Q8TED0 518 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms