RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ANKRD34CP0C6C1 535 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ALPPL2P10696 532 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 HOXB6P17509 224 aaKnown RBP10.39□□□□□ -0.75
PABPN1-203ENST00000553960 TPP2P29144 1249 aaPredicted RBP10.39□□□□□ -0.75
PABPN1-203ENST00000553960 PTPN6P29350 595 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 BCL6P41182 706 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 GABRA4P48169 554 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 TRAP1Q12931 704 aaKnown RBP10.39□□□□□ -0.75
PABPN1-203ENST00000553960 PTGR1Q14914 329 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 PLCL1Q15111 1095 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ANGPT1Q15389 498 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 CEBPEQ15744 281 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ZNF542PQ5EBM4 170 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ZC3H12BQ5HYM0 836 aaKnown RBP10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ANXA8L1Q5VT79 327 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 GARNL3Q5VVW2 1013 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 REP15Q6BDI9 236 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 FCRL6Q6DN72 434 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 SCIMPQ6UWF3 145 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 PRSS42Q7Z5A4 293 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 NET1Q7Z628 596 aaPredicted RBP10.39□□□□□ -0.75
PABPN1-203ENST00000553960 UBE3DQ7Z6J8 389 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 NUDT13Q86X67 352 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ZNF655Q8N720 491 aaPredicted RBP10.39□□□□□ -0.75
PABPN1-203ENST00000553960 C7orf57Q8NEG2 295 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 OR52E4Q8NGH9 312 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 OR9I1Q8NGQ6 314 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 SLC13A3Q8WWT9 602 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 PATE1Q8WXA2 126 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 NAT6Q93015 286 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 LRRC58Q96CX6 371 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 RCN3Q96D15 328 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ZDHHC12Q96GR4 267 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 APOLD1Q96LR9 279 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 CCDC115Q96NT0 180 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 HBEGFQ99075 208 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 SH3GL1Q99961 368 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ACAT2Q9BWD1 397 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 REEP4Q9H6H4 257 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 RMND5AQ9H871 391 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 WDR41Q9HAD4 459 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 SPAG4Q9NPE6 437 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 SERHLQ9NQF3 203 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 PRDM7Q9NQW5 492 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ATAD3AQ9NVI7 634 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 GIMAP2Q9UG22 337 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 CROTQ9UKG9 612 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 DOLKQ9UPQ8 538 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 POLR3HQ9Y535 204 aaPredicted RBP10.39□□□□□ -0.75
PABPN1-203ENST00000553960 MUC3AQ02505 3323 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 IGHV1OR21-1A0A087WYE8 117 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 A0A096LPI6 279 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 PRSS51A0A1B0GVH4 220 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 BLACEA4D250 179 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 EME2A4GXA9 379 aaPredicted RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 FITM1A5D6W6 292 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 MRASO14807 208 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 HAT1O14929 419 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SCAMP2O15127 329 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 NDUFS4O43181 175 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 PCDH7O60245 1069 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 PROS1P07225 676 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SLC35G6P0C7Q6 338 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 PCNAP12004 261 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 ZNF10P21506 573 aaPredicted RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SLC6A2P23975 617 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 TACR1P25103 407 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 PGM1P36871 562 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 KIR3DL1P43629 444 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 CCT8P50990 548 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 EEFSECP57772 596 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 KCNJ2P63252 427 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 YBX1P67809 324 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 TXNL4AP83876 142 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 RGS1Q08116 209 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SLC14A1Q13336 389 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 ART3Q13508 389 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 C1orf61Q13536 156 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 FAM53BQ14153 422 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 HEPACAMQ14CZ8 416 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 UGT8Q16880 541 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 PRTGQ2VWP7 1150 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 HLA-BQ31612 363 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 GLIPR1L2Q4G1C9 344 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SGO1Q5FBB7 561 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SAMD4BQ5PRF9 694 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 YOD1Q5VVQ6 348 aaPredicted RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 OR4C11Q6IEV9 310 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 GK5Q6ZS86 529 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 GPR155Q7Z3F1 870 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 PTRH1Q86Y79 214 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 PLXDC1Q8IUK5 500 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SCUBE1Q8IWY4 988 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SLC35F3Q8IY50 421 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SAMD14Q8IZD0 417 aaPredicted RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 FBXW8Q8N3Y1 598 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 DNAJC22Q8N4W6 341 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 DEFB119Q8N690 84 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 POU5F2Q8N7G0 328 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 FBXO27Q8NI29 283 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms