RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 C6orf136Q5SQH8 315 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 HES3Q5TGS1 186 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 TMEM198Q66K66 360 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 TRIM40Q6P9F5 258 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 FOXR1Q6PIV2 292 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 Q6ZSR9 355 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 ARHGAP22Q7Z5H3 698 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 PIGWQ7Z7B1 504 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SLCO6A1Q86UG4 719 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 ZFAND4Q86XD8 727 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SLITRK4Q8IW52 837 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 GPR135Q8IZ08 494 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 D2HGDHQ8N465 521 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 C1orf52Q8N6N3 182 aaKnown RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 TTC29Q8NA56 475 aaPredicted RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 CEP70Q8NHQ1 597 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 NT5CQ8TCD5 201 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 ACTRT2Q8TDY3 377 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 KLHL6Q8WZ60 621 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 RGMAQ96B86 450 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SLC41A2Q96JW4 573 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 OR6C1Q96RD1 312 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 C17orf62Q9BQA9 187 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 CCDC28BQ9BUN5 200 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SARGQ9BW04 601 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SORBS1Q9BX66 1292 aaKnown RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 STRADBQ9C0K7 418 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SLC7A5P2Q9GIP4 190 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SPRTNQ9H040 489 aaPredicted RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 COPS7BQ9H9Q2 264 aaPredicted RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 FGF21Q9NSA1 209 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 TRIM33Q9UPN9 1127 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 EIF3LQ9Y262 564 aaKnown RBP9.31□□□□□ -0.92
CHD8-204ENST00000553622 TSC22D4Q9Y3Q8 395 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 PCDHGA1Q9Y5H4 931 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 DMDP11532 3685 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 CEP250Q9BV73 2442 aa9.31□□□□□ -0.92
CHD8-204ENST00000553622 SERTM1A2A2V5 107 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 HYKKA2RU49 373 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 URADA6NGE7 173 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 PLPP1O14494 284 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 TXNDC9O14530 226 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 UBDO15205 165 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 PCDH7O60245 1069 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 SRPX2O60687 465 aaPredicted RBP9.3□□□□□ -0.92
CHD8-204ENST00000553622 B3GALT4O96024 378 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 MT-CO3P00414 261 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 GBAP04062 536 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 KLK1P06870 262 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 CSRP1P21291 193 aaKnown RBP9.3□□□□□ -0.92
CHD8-204ENST00000553622 MAPK1P28482 360 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 ITGA1P56199 1179 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 STX1BP61266 288 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 ERVK-8P63133 956 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 BTN3A2P78410 334 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 ACY1Q03154 408 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 ZFP36L1Q07352 338 aaKnown RBP9.3□□□□□ -0.92
CHD8-204ENST00000553622 CUL3Q13618 768 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 C16orf72Q14CZ0 275 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 NDUFA9Q16795 377 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 RFTN2Q52LD8 501 aaPredicted RBP9.3□□□□□ -0.92
CHD8-204ENST00000553622 TCTE1Q5JU00 501 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 DEPDC1Q5TB30 811 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 IL23RQ5VWK5 629 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 CYP20A1Q6UW02 462 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 RNF165Q6ZSG1 346 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 LARP4Q71RC2 724 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHD8-204ENST00000553622 ABHD13Q7L211 337 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 COMMD6Q7Z4G1 85 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 SPATA19Q7Z5L4 167 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 GLRX5Q86SX6 157 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 LIX1Q8N485 282 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 METTL27Q8N6F8 245 aaPredicted RBP9.3□□□□□ -0.92
CHD8-204ENST00000553622 AGBL5Q8NDL9 886 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 OR2L5Q8NG80 312 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 OR1L3Q8NH93 324 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 CLHC1Q8NHS4 586 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 GAL3ST3Q96A11 431 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 MS4A6EQ96DS6 147 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 MAELQ96JY0 434 aaKnown RBP9.3□□□□□ -0.92
CHD8-204ENST00000553622 DEPDC7Q96QD5 511 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 CTRCQ99895 268 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 OCIAD1Q9NX40 245 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 TOR4AQ9NXH8 423 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 NOP53Q9NZM5 478 aaKnown RBP9.3□□□□□ -0.92
CHD8-204ENST00000553622 SEMA5BQ9P283 1151 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 PDP2Q9P2J9 529 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 NDOR1Q9UHB4 597 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 SERTAD3Q9UJW9 196 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 RARRES3Q9UL19 164 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 RUVBL1Q9Y265 456 aaKnown RBP9.3□□□□□ -0.92
CHD8-204ENST00000553622 CCL27Q9Y4X3 112 aa9.3□□□□□ -0.92
CHD8-204ENST00000553622 ZNF860A6NHJ4 632 aa9.29□□□□□ -0.92
CHD8-204ENST00000553622 TMX2-CTNND1H3BSU7 103 aa9.29□□□□□ -0.92
CHD8-204ENST00000553622 FCHO1O14526 889 aa9.29□□□□□ -0.92
CHD8-204ENST00000553622 SLC30A4O14863 429 aa9.29□□□□□ -0.92
CHD8-204ENST00000553622 ZSCAN9O15535 394 aaPredicted RBP9.29□□□□□ -0.92
CHD8-204ENST00000553622 HYAL3O43820 417 aaPredicted RBP9.29□□□□□ -0.92
CHD8-204ENST00000553622 SEMA3DO95025 777 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms