RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 NAALAD2Q9Y3Q0 740 aa17.48■□□□□ 0.39
CPSF2-202ENST00000553427 TSC22D4Q9Y3Q8 395 aa17.48■□□□□ 0.39
CPSF2-202ENST00000553427 HS3ST3B1Q9Y662 390 aa17.48■□□□□ 0.39
CPSF2-202ENST00000553427 V9GYY5 206 aaPredicted RBP17.48■□□□□ 0.39
CPSF2-202ENST00000553427 COL6A6A6NMZ7 2263 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 ARGFXA6NJG6 315 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 MKRN2OSH3BPM6 223 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 SGK494L7N484 410 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 AGPSO00116 658 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 SOCS6O14544 535 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 CEACAM4O75871 244 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 BMP10O95393 424 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 SERPIND1P05546 499 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 SBK3P0C264 359 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 ZNF888P0CJ79 500 aaPredicted RBP17.47■□□□□ 0.39
CPSF2-202ENST00000553427 ATXN8OSP0DMR3 200 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 HNF4AP41235 474 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 GTF2H2Q13888 395 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 HIST2H2ACQ16777 129 aaPredicted RBP17.47■□□□□ 0.39
CPSF2-202ENST00000553427 VWA2Q5GFL6 755 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 LIPJQ5W064 366 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 HIST2H2AA3Q6FI13 130 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 GRHL2Q6ISB3 625 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 GTF2H2CQ6P1K8 395 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 SH2D5Q6ZV89 423 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 VN1R5Q7Z5H4 357 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 RIBC1Q8N443 379 aaPredicted RBP17.47■□□□□ 0.39
CPSF2-202ENST00000553427 OR1F2PQ96R84 312 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 C1QTNF3Q9BXJ4 246 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 TBK1Q9UHD2 729 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 C3orf18Q9UK00 162 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 ANGPTL3Q9Y5C1 460 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 PCDHGA9Q9Y5G4 932 aaKnown RBP17.47■□□□□ 0.39
CPSF2-202ENST00000553427 PCSK5Q92824 1860 aa17.47■□□□□ 0.39
CPSF2-202ENST00000553427 LRIT2A6NDA9 550 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 ANKDD1BA6NHY2 528 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 EIF4E1BA6NMX2 242 aaKnown RBP17.46■□□□□ 0.39
CPSF2-202ENST00000553427 IDSB3KWA1 339 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 RDH16O75452 317 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 SIX3O95343 332 aaPredicted RBP17.46■□□□□ 0.39
CPSF2-202ENST00000553427 TBX6O95947 436 aaPredicted RBP17.46■□□□□ 0.39
CPSF2-202ENST00000553427 RPS17P08708 135 aaKnown RBP17.46■□□□□ 0.39
CPSF2-202ENST00000553427 PYGBP11216 843 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 EEF1DP29692 281 aaKnown RBP17.46■□□□□ 0.39
CPSF2-202ENST00000553427 MAT1AQ00266 395 aaKnown RBP17.46■□□□□ 0.39
CPSF2-202ENST00000553427 RBBP7Q16576 425 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 SYT16Q17RD7 645 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 DEFB134Q4QY38 66 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 DCAF10Q5QP82 559 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 MED27Q6P2C8 311 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 SHISA6Q6ZSJ9 500 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 GOLGA7Q7Z5G4 137 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 OR51Q1Q8NH59 317 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 C9orf43Q8TAL5 461 aaPredicted RBP17.46■□□□□ 0.39
CPSF2-202ENST00000553427 EPS8L3Q8TE67 593 aaKnown RBP17.46■□□□□ 0.39
CPSF2-202ENST00000553427 PARD6BQ9BYG5 372 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 TRIM55Q9BYV6 548 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 AICDAQ9GZX7 198 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 SLC25A18Q9H1K4 315 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 ACSS2Q9NR19 701 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 DCDC2Q9UHG0 476 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 ADGRE2Q9UHX3 823 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 PCTPQ9UKL6 214 aa17.46■□□□□ 0.39
CPSF2-202ENST00000553427 LRRC14BA6NHZ5 514 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 A8MT66 165 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 C1QL1O75973 258 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 XCR1P46094 333 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 SLCO1A2P46721 670 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 EMP2P54851 167 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 SOX8P57073 446 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 TOR1AIP1Q5JTV8 583 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 TCTN3Q6NUS6 607 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 KIRREL2Q6UWL6 708 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 L3MBTL4Q8NA19 623 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 MS4A6EQ96DS6 147 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 PHF21BQ96EK2 531 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 ABHD17AQ96GS6 310 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 YIPF2Q9BWQ6 316 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 KLHL31Q9H511 634 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 IPPKQ9H8X2 491 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 MLXIPLQ9NP71 852 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 TMEM216Q9P0N5 145 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 HCN3Q9P1Z3 774 aa17.45■□□□□ 0.38
CPSF2-202ENST00000553427 CCDC88CQ9P219 2028 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 LOC102723996A0A087X1L8 192 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 A0A088AWK7 358 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 C4orf51C9J302 202 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 H0YIV9 168 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 GOLGA8RI6L899 631 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 FFAR3O14843 346 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 GPR42O15529 346 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 GLRA3O75311 464 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 HEXBP07686 556 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 ACPPP15309 386 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 KRT15P19012 456 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 TAC1P20366 129 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 ZNF10P21506 573 aaPredicted RBP17.44■□□□□ 0.38
CPSF2-202ENST00000553427 HNRNPH1P31943 449 aaKnown RBP17.44■□□□□ 0.38
CPSF2-202ENST00000553427 PIK3CBP42338 1070 aa17.44■□□□□ 0.38
CPSF2-202ENST00000553427 CHAF1BQ13112 559 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms