RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PKP4Q99569 1192 aa14.26□□□□□ -0.13
CACNB3-220ENST00000551716 NHEJ1Q9H9Q4 299 aaPredicted RBP14.26□□□□□ -0.13
CACNB3-220ENST00000551716 SPTLC3Q9NUV7 552 aa14.26□□□□□ -0.13
CACNB3-220ENST00000551716 ERVK-11Q9UQG0 969 aa14.26□□□□□ -0.13
CACNB3-220ENST00000551716 NAALAD2Q9Y3Q0 740 aa14.26□□□□□ -0.13
CACNB3-220ENST00000551716 SAGE2PA6NJ88 616 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 AQP7O14520 342 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 PFDN6O15212 129 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 SUSD5O60279 629 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 ITGA10O75578 1167 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 SLC16A8O95907 504 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 TPM3P06753 285 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 ADH7P40394 386 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 CLCN2P51788 898 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 SNTB1Q13884 538 aaKnown RBP14.25□□□□□ -0.13
CACNB3-220ENST00000551716 GBX1Q14549 363 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 FBXL19-AS1Q494R0 122 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 WLSQ5T9L3 541 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 PPP1R21Q6ZMI0 780 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 KIF18BQ86Y91 864 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 SLC13A5Q86YT5 568 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-220ENST00000551716 FBXO15Q8NCQ5 510 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-220ENST00000551716 PSD4Q8NDX1 1056 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 ARMC2Q8NEN0 867 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 ZNF480Q8WV37 535 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 SLC13A3Q8WWT9 602 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 KRT35Q92764 455 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 PTCHD1Q96NR3 888 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 FAM118BQ9BPY3 351 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 BDH2Q9BUT1 245 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 PCBD2Q9H0N5 130 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 PLEKHF2Q9H8W4 249 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 CLK4Q9HAZ1 481 aaKnown RBP14.25□□□□□ -0.13
CACNB3-220ENST00000551716 MTRF1LQ9UGC7 380 aaKnown RBP14.25□□□□□ -0.13
CACNB3-220ENST00000551716 R3HDM2Q9Y2K5 976 aaKnown RBP14.25□□□□□ -0.13
CACNB3-220ENST00000551716 YARS2Q9Y2Z4 477 aaKnown RBP14.25□□□□□ -0.13
CACNB3-220ENST00000551716 PCDHA3Q9Y5H8 950 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 NBEAL1Q6ZS30 2694 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 DNAJC13O75165 2243 aa14.25□□□□□ -0.13
CACNB3-220ENST00000551716 TUBAL3A6NHL2 446 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 DVL2O14641 736 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 MBD3O95983 291 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 STATHP02808 62 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 SLC35G6P0C7Q6 338 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 GRK3P35626 688 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 ASCL1P50553 236 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 SSR4P51571 173 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 SNRPNP63162 240 aaKnown RBP14.24□□□□□ -0.13
CACNB3-220ENST00000551716 TRIM14Q14142 442 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 C11orf63Q6NUN7 778 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 QSOX2Q6ZRP7 698 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 GK5Q6ZS86 529 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 CAPN12Q6ZSI9 719 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 TRILQ7L0X0 811 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 SDCCAG8Q86SQ7 713 aaPredicted RBP14.24□□□□□ -0.13
CACNB3-220ENST00000551716 ASPGQ86U10 573 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 PDSS2Q86YH6 399 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 P3H2Q8IVL5 708 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 SHISA5Q8N114 240 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 FAM109AQ8N4B1 249 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 NFAM1Q8NET5 270 aaPredicted RBP14.24□□□□□ -0.13
CACNB3-220ENST00000551716 OR2M7Q8NG81 312 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 ZNF778Q96MU6 729 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 MACROD1Q9BQ69 325 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 ATG10Q9H0Y0 220 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 GOLPH3Q9H4A6 298 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 ABCF3Q9NUQ8 709 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 KCMF1Q9P0J7 381 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 MARCH4Q9P2E8 410 aaPredicted RBP14.24□□□□□ -0.13
CACNB3-220ENST00000551716 TCAF1Q9Y4C2 921 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 PCDHGB3Q9Y5G1 929 aa14.24□□□□□ -0.13
CACNB3-220ENST00000551716 GOLGA6L9A6NEM1 432 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 FAM166BA8MTA8 275 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 A8MVJ9 347 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 GOLGA6L22H0YM25 854 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 CES2O00748 559 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 CHRM3P20309 590 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 EIF3BP55884 814 aaKnown RBP14.23□□□□□ -0.13
CACNB3-220ENST00000551716 SLC10A1Q14973 349 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 TERF2Q15554 542 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 KLHL38Q2WGJ6 581 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 CATSPEREQ5SY80 951 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 CAPN13Q6MZZ7 669 aaPredicted RBP14.23□□□□□ -0.13
CACNB3-220ENST00000551716 KRTAP1-3Q8IUG1 177 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 KCT2Q8NC54 265 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 PPFIBP2Q8ND30 876 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 PPHLN1Q8NEY8 458 aaKnown RBP14.23□□□□□ -0.13
CACNB3-220ENST00000551716 B3GNT7Q8NFL0 401 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 ZCCHC10Q8TBK6 192 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 GBP4Q96PP9 640 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 CHP1Q99653 195 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 RBCK1Q9BYM8 510 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 TTTY12Q9BZ98 90 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 HPF1Q9NWY4 346 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 ALKBH4Q9NXW9 302 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 FBXW2Q9UKT8 454 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 GTF3C3Q9Y5Q9 886 aa14.23□□□□□ -0.13
CACNB3-220ENST00000551716 TRBV11-1A0A0K0K1C0 115 aa14.22□□□□□ -0.13
CACNB3-220ENST00000551716 CHST10O43529 356 aa14.22□□□□□ -0.13
CACNB3-220ENST00000551716 ZBTB14O43829 449 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms