RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 LYZL4Q96KX0 146 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 CCDC114Q96M63 670 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 RUFY1Q96T51 708 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 TMEM204Q9BSN7 226 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 DUSP16Q9BY84 665 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 ULBP3Q9BZM4 244 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 EDEM3Q9BZQ6 932 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 TM6SF2Q9BZW4 377 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 MBNL1Q9NR56 388 aaKnown RBP4.09□□□□□ -1.75
CBX5-203ENST00000547872 AGPAT3Q9NRZ7 376 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 OLA1Q9NTK5 396 aaKnown RBP4.09□□□□□ -1.75
CBX5-203ENST00000547872 MYO6Q9UM54 1294 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 HBS1LQ9Y450 684 aaKnown RBP4.09□□□□□ -1.75
CBX5-203ENST00000547872 CLDN16Q9Y5I7 305 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 RPS6KL1Q9Y6S9 549 aa4.09□□□□□ -1.75
CBX5-203ENST00000547872 MN1Q10571 1320 aaPredicted RBP4.09□□□□□ -1.75
CBX5-203ENST00000547872 CHD5Q8TDI0 1954 aa4.09□□□□□ -1.76
CBX5-203ENST00000547872 AHCTF1Q8WYP5 2266 aa4.09□□□□□ -1.76
CBX5-203ENST00000547872 H3BQV1 296 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 KCNAB3O43448 404 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 SMAD6O43541 496 aaKnown RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 RGS14O43566 566 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 SLC25A17O43808 307 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 CEP104O60308 925 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 LRP4O75096 1905 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 GUCY1B2O75343 617 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 SORBS2O94875 1100 aaKnown RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 CPNE6O95741 557 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 HLA-DRAP01903 254 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 APOEP02649 317 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 TRIM49P0CI25 452 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 TRIM49CP0CI26 452 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 T-ENOLP0DO92 83 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 SRCP12931 536 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 GAP43P17677 238 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 HOXD3P31249 432 aaPredicted RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 ARRB2P32121 409 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 PGM1P36871 562 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 GPD2P43304 727 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 LEPRP48357 1165 aaKnown RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 THBS3P49746 956 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 PMS2P54278 862 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 ARSFP54793 590 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 MC1RQ01726 317 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 POU5F1Q01860 360 aaKnown RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 ZFP36L1Q07352 338 aaKnown RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 GPS2Q13227 327 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 SPTAN1Q13813 2472 aaKnown RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 KLHL40Q2TBA0 621 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 ZRANB3Q5FWF4 1079 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 ATG9BQ674R7 924 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 KIAA1161Q6NSJ0 714 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 C22orf39Q6P5X5 142 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 MACC1Q6ZN28 852 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 Q6ZSV7 163 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 STXBP4Q6ZWJ1 553 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 BHLHA9Q7RTU4 235 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 ZNF367Q7RTV3 350 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 ADGRG6Q86SQ4 1221 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 TAC4Q86UU9 113 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 CPOQ8IVL8 374 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 UNC45BQ8IWX7 931 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 SLC34A3Q8N130 599 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 ZNF557Q8N988 423 aaPredicted RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 OR4N2Q8NGD1 307 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 CXorf40AQ8TE69 158 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 TMEM18Q96B42 140 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 TMEM159Q96B96 161 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 SNRNP40Q96DI7 357 aaKnown RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 RTP4Q96DX8 246 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 FEM1CQ96JP0 617 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 RPRD1AQ96P16 312 aaPredicted RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 RANBP9Q96S59 729 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 DDX50Q9BQ39 737 aaKnown RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 TM6SF1Q9BZW5 370 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 ILKAPQ9H0C8 392 aaPredicted RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 ST6GALNAC4Q9H4F1 302 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 APOBEC3GQ9HC16 384 aaKnown RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 COPG2Q9UBF2 871 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 LNPEPQ9UIQ6 1025 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 PILRAQ9UKJ1 303 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 TSPAN16Q9UKR8 245 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 VANGL2Q9ULK5 521 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 NAALADL1Q9UQQ1 740 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 ENTPD4Q9Y227 616 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 FADS3Q9Y5Q0 445 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 SNX10Q9Y5X0 201 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 PTGDR2Q9Y5Y4 395 aa4.08□□□□□ -1.76
CBX5-203ENST00000547872 USP9YO00507 2555 aaPredicted RBP4.08□□□□□ -1.76
CBX5-203ENST00000547872 RP1P56715 2156 aa4.07□□□□□ -1.76
CBX5-203ENST00000547872 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
CBX5-203ENST00000547872 ZSCAN5CA6NGD5 496 aaPredicted RBP4.07□□□□□ -1.76
CBX5-203ENST00000547872 FAM90A7PA6NKC0 464 aa4.07□□□□□ -1.76
CBX5-203ENST00000547872 FAM90A22PA8MWA6 464 aa4.07□□□□□ -1.76
CBX5-203ENST00000547872 FAM90A12PA8MX19 464 aa4.07□□□□□ -1.76
CBX5-203ENST00000547872 FAM90A23PA8MXZ1 464 aa4.07□□□□□ -1.76
CBX5-203ENST00000547872 C10orf142B7Z368 130 aa4.07□□□□□ -1.76
CBX5-203ENST00000547872 INAFM1C9JVW0 142 aa4.07□□□□□ -1.76
CBX5-203ENST00000547872 I6L893 689 aaPredicted RBP4.07□□□□□ -1.76
CBX5-203ENST00000547872 M0QYV0 167 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms