RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 IDSB3KWA1 339 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 K7EM74 188 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 JRKO75564 520 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 SIX3O95343 332 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 SMIM10L1P0DMW3 83 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 GSTM2P28161 218 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 XCR1P46094 333 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 EMP2P54851 167 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 RAB8AP61006 207 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 PCDH1Q08174 1060 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 LAPTM5Q13571 262 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 PAGE2BQ5JRK9 111 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 TOR1AIP1Q5JTV8 583 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 ADNP2Q6IQ32 1131 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 TCTN3Q6NUS6 607 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 VN1R5Q7Z5H4 357 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 PTGR2Q8N8N7 351 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 MZB1Q8WU39 189 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 SMIM10Q96HG1 83 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 SEC16BQ96JE7 1060 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 MRPL57Q9BQC6 102 aaKnown RBP17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 FBXL4Q9UKA2 621 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 TP53TG5Q9Y2B4 290 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 ANGPTL3Q9Y5C1 460 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 TNPO3Q9Y5L0 923 aaKnown RBP17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 SPTA1P02549 2419 aa17.72■□□□□ 0.43
PRPF40B-206ENST00000547764 ANKDD1BA6NHY2 528 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 A6NL46 340 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 C4orf51C9J302 202 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 DNAJB6O75190 326 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 CLEC3AO75596 197 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 CEACAM4O75871 244 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 HEXBP07686 556 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 NR1D1P20393 614 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 HSD17B3P37058 310 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 HIST2H2ACQ16777 129 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 LACTB2Q53H82 288 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 HIST2H2AA3Q6FI13 130 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 TMEM151AQ8N4L1 468 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 CLEC1AQ8NC01 280 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 FDCSPQ8NFU4 85 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 OR11G2Q8NGC1 345 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 OR5T3Q8NGG3 340 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 CCT6BQ92526 530 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 PHF21BQ96EK2 531 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 SLC25A23Q9BV35 468 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 MRPL46Q9H2W6 279 aaKnown RBP17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 RHBGQ9H310 441 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 MKL2Q9ULH7 1088 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 TMCO1Q9UM00 188 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 PCDHGA9Q9Y5G4 932 aaKnown RBP17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 CFAP46Q8IYW2 2715 aa17.71■□□□□ 0.43
PRPF40B-206ENST00000547764 LRIT2A6NDA9 550 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 B8ZZF3 427 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 GOLGA8RI6L899 631 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 E2F3O00716 465 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 SMIM24O75264 130 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 ALOX12BO75342 701 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 TBX6O95947 436 aaPredicted RBP17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 PDGFAP04085 211 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 SBK3P0C264 359 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 HNRNPH1P31943 449 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 SLCO1A2P46721 670 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 EFNA3P52797 238 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 STXBP1P61764 594 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 SKP1P63208 163 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 OLR1P78380 273 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 GTF2H2Q13888 395 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 FAAH2Q6GMR7 532 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 NIPAL1Q6NVV3 410 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 GTF2H2CQ6P1K8 395 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 METTL2BQ6P1Q9 378 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 WDR93Q6P2C0 686 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 GOLGA7Q7Z5G4 137 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 PTRH1Q86Y79 214 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 CNPY4Q8N129 248 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 ACMSDQ8TDX5 336 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 C8orf44Q96CB5 159 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 PEX11GQ96HA9 241 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 MLXIPLQ9NP71 852 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 ATP13A2Q9NQ11 1180 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 TMEM216Q9P0N5 145 aa17.7■□□□□ 0.42
PRPF40B-206ENST00000547764 A0A1W2PPM1 405 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 SMIM23A6NLE4 172 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 STX16-NPEPL1H3BU86 382 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 STX16O14662 325 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 CHST10O43529 356 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 PYGBP11216 843 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 ACPPP15309 386 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 EEF1DP29692 281 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 RAPSNQ13702 412 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 ERCC6LQ2NKX8 1250 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 TUBB8Q3ZCM7 444 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 MINDY4Q4G0A6 757 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 GRHL2Q6ISB3 625 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 MED27Q6P2C8 311 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 ASB18Q6ZVZ8 466 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 LCA5Q86VQ0 697 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 TDRPQ86YL5 185 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 LAS2Q8IYD9 372 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms