RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TAS2R9Q9NYW1 312 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 PLAGL1Q9UM63 463 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 EYSQ5T1H1 3165 aa14.13□□□□□ -0.15
HOXC11-202ENST00000546378 M0R082 166 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 COCHO43405 550 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 CDRT1O95170 752 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 TSPAN19P0C672 248 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 ITGB8P26012 769 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 CTSOP43234 321 aaPredicted RBP14.12□□□□□ -0.15
HOXC11-202ENST00000546378 ARF5P84085 180 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 CSTF3Q12996 717 aaKnown RBP14.12□□□□□ -0.15
HOXC11-202ENST00000546378 SLC14A2Q15849 920 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 LRRC26Q2I0M4 334 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 C22orf42Q6IC83 251 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 ZNF517Q6ZMY9 492 aaPredicted RBP14.12□□□□□ -0.15
HOXC11-202ENST00000546378 PAPD5Q8NDF8 572 aaKnown RBP14.12□□□□□ -0.15
HOXC11-202ENST00000546378 BCL7CQ8WUZ0 217 aaPredicted RBP14.12□□□□□ -0.15
HOXC11-202ENST00000546378 ISG20Q96AZ6 181 aaKnown RBP14.12□□□□□ -0.15
HOXC11-202ENST00000546378 OMA1Q96E52 524 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 MGLLQ99685 303 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 TMEM106CQ9BVX2 250 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 SGK2Q9HBY8 427 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 IL1RAPQ9NPH3 570 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 TMEM202A6NGA9 273 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 C6orf47O95873 294 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 CNTN1Q12860 1018 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 PLEKHG6Q3KR16 790 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 GLB1L3Q8NCI6 653 aaPredicted RBP14.12□□□□□ -0.15
HOXC11-202ENST00000546378 SLC39A13Q96H72 371 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 TMEM169Q96HH4 297 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 TBX5Q99593 518 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 CDADC1Q9BWV3 514 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 TBC1D17Q9HA65 648 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 SLC9A8Q9Y2E8 581 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 TMED5Q9Y3A6 229 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 SLC28A1O00337 649 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 ADAMDEC1O15204 470 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 KMOO15229 486 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 DYRK3O43781 588 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 CCNYL3P0C7X3 344 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 BPIP17213 487 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 FPR1P21462 350 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 LSM11P83369 360 aaKnown RBP eCLIP14.12□□□□□ -0.15
HOXC11-202ENST00000546378 CACNG1Q06432 222 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 NFATC2Q13469 925 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 IRF3Q14653 427 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 SYTL3Q4VX76 610 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 ZNF57Q68EA5 555 aaPredicted RBP14.12□□□□□ -0.15
HOXC11-202ENST00000546378 GPR149Q86SP6 731 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 COQ8BQ96D53 544 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 P2RY13Q9BPV8 354 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 ASPNQ9BXN1 380 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 DNMT3LQ9UJW3 386 aa14.12□□□□□ -0.15
HOXC11-202ENST00000546378 PRR23AA6NEV1 266 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 ZSCAN5BA6NJL1 495 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 GLOD5A6NK44 160 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 E7EQ34 232 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 DSCR3O14972 297 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 C9P02748 559 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 S100A1P23297 94 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 CNR2P34972 360 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 RFX3P48380 749 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 ELP6Q0PNE2 266 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 BAK1Q16611 211 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 CPTPQ5TA50 214 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 RNF130Q86XS8 419 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 RBFAQ8N0V3 343 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 GPR26Q8NDV2 337 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 FAM129BQ96TA1 746 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 DUSP26Q9BV47 211 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 POLR2J2Q9GZM3 115 aaKnown RBP14.11□□□□□ -0.15
HOXC11-202ENST00000546378 HEBP1Q9NRV9 189 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 TRPC4Q9UBN4 977 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 SCML2Q9UQR0 700 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 PCDHGA6Q9Y5G7 932 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 MYOFQ9NZM1 2061 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 WASHC1A8K0Z3 465 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 H3BSH0 61 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 NTN1O95631 604 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 CLTBP09497 229 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 ADORA3P0DMS8 318 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 JUNBP17275 347 aaPredicted RBP14.11□□□□□ -0.15
HOXC11-202ENST00000546378 SYN1P17600 705 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 TNFSF8P32971 234 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 HSPB3Q12988 150 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 PPIGQ13427 754 aaKnown RBP eCLIP14.11□□□□□ -0.15
HOXC11-202ENST00000546378 INSL4Q14641 139 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 ACOX1Q15067 660 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 TYSND1Q2T9J0 566 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 WASH2PQ6VEQ5 465 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 CEP295NLQ96MC4 621 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 MUC13Q9H3R2 512 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 MARCH5Q9NX47 278 aa14.11□□□□□ -0.15
HOXC11-202ENST00000546378 A0A1W2PQ09 198 aa14.1□□□□□ -0.15
HOXC11-202ENST00000546378 MTMR11A4FU01 709 aa14.1□□□□□ -0.15
HOXC11-202ENST00000546378 NUAK1O60285 661 aa14.1□□□□□ -0.15
HOXC11-202ENST00000546378 PRR35P0CG20 571 aa14.1□□□□□ -0.15
HOXC11-202ENST00000546378 CCR7P32248 378 aa14.1□□□□□ -0.15
HOXC11-202ENST00000546378 GAB1Q13480 694 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms