RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 HAPLN2Q9GZV7 340 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 CAPN14A8MX76 684 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 OXSR1O95747 527 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 LINGO3P0C6S8 592 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 C1GALT1C1LP0DN25 315 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 SHQ1Q6PI26 577 aaKnown RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 TOMM5Q8N4H5 51 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 BCL7BQ9BQE9 202 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 TRMT61BQ9BVS5 477 aaKnown RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 HCN3Q9P1Z3 774 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 ADAMTS6Q9UKP5 1117 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 PKD1L3Q7Z443 1732 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 DLGAP1O14490 977 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 INPPL1O15357 1258 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 SEMA3DO95025 777 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 SHMT2P34897 504 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 PGDP52209 483 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 GPR68Q15743 365 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 OR6K6Q8NGW6 343 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 DNAJA4Q8WW22 397 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 IGSF8Q969P0 613 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 PIP5K1AQ99755 562 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 MS4A12Q9NXJ0 267 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 PMF1-BGLAPU3KQ54 211 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 IQCMA0A1B0GVH7 501 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 METTL21EPA6NDL7 271 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 VEGFDO43915 354 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 OAZ2O95190 189 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 PDYNP01213 254 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 PABPC4LP0CB38 370 aaKnown RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 EDNRAP25101 427 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 MLLT3P42568 568 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 RCAN2Q14206 197 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 GK3PQ14409 553 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 TEAD2Q15562 447 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 RPS27LQ71UM5 84 aaKnown RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 GPRIN1Q7Z2K8 1008 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 C7orf61Q8IZ16 206 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 GPR150Q8NGU9 434 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 GFM1Q96RP9 751 aaKnown RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 TAS2R9Q9NYW1 312 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 MMP20O60882 483 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 JUNP05412 331 aaKnown RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 MAP3K8P41279 467 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 CDKL4Q5MAI5 379 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 NCEH1Q6PIU2 408 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 MRPL10Q7Z7H8 261 aaKnown RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 AMIGO3Q86WK7 504 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 SLC15A3Q8IY34 581 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 IRF7Q92985 503 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 DLGAP4Q9Y2H0 992 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 MID1O15344 667 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 APLP1P51693 650 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 CDKN2DP55273 166 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 GRB7Q14451 532 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 SLC14A2Q15849 920 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 PIGGQ5H8A4 983 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF517Q6ZMY9 492 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 CTU1Q7Z7A3 348 aaKnown RBP12.1□□□□□ -0.47
COL4A6-209ENST00000545689 SDR16C5Q8N3Y7 309 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF676Q8N7Q3 588 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 PSD4Q8NDX1 1056 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 DHRS4Q9BTZ2 278 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 TBL1XR1Q9BZK7 514 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 GMEB1Q9Y692 573 aa12.1□□□□□ -0.47
COL4A6-209ENST00000545689 ISPDA4D126 451 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 GRID2O43424 1007 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 PFKLP17858 780 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 HLCSP50747 726 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 CEACAM7Q14002 265 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 CLEC12AQ5QGZ9 265 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 SLC9B2Q86UD5 537 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 ZSWIM9Q86XI8 627 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 PIGKQ92643 395 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 SIPA1Q96FS4 1042 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 OR51B5Q9H339 312 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 AMBNQ9NP70 447 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 ELOVL2Q9NXB9 296 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 RPS3P23396 243 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL4A6-209ENST00000545689 CASP9P55211 416 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 C6orf141Q5SZD1 244 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 NRROSQ86YC3 692 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 PROKR2Q8NFJ6 384 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 ZFP3Q96NJ6 502 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 YIPF4Q9BSR8 244 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-209ENST00000545689 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 SCDO00767 359 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 FGF18O76093 207 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 PIM1P11309 404 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-209ENST00000545689 ATF6P18850 670 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 RBM34P42696 430 aaKnown RBP12.09□□□□□ -0.47
COL4A6-209ENST00000545689 PUM1Q14671 1186 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL4A6-209ENST00000545689 RAB39AQ14964 217 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 PON3Q15166 354 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF181Q2M3W8 571 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 TCEAL6Q6IPX3 200 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 OR10T2Q8NGX3 314 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 GLYATL1Q969I3 302 aa12.09□□□□□ -0.47
COL4A6-209ENST00000545689 A0A1W2PRQ8 180 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms