RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SCN3AQ9NY46 2000 aa13.74□□□□□ -0.21
RTN3-214ENST00000545432 A0A0G2JNJ9 132 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 BCKDKO14874 412 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 CDC40O60508 579 aaKnown RBP eCLIP13.73□□□□□ -0.21
RTN3-214ENST00000545432 GALR3O60755 368 aaPredicted RBP13.73□□□□□ -0.21
RTN3-214ENST00000545432 CDC123O75794 336 aaPredicted RBP13.73□□□□□ -0.21
RTN3-214ENST00000545432 PDE9AO76083 593 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 GLSO94925 669 aaPredicted RBP13.73□□□□□ -0.21
RTN3-214ENST00000545432 GLI4P10075 376 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 CHRM3P20309 590 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 JAK1P23458 1154 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 NMBRP28336 390 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 GPR143P51810 404 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 TSTA3Q13630 321 aaPredicted RBP13.73□□□□□ -0.21
RTN3-214ENST00000545432 HERC3Q15034 1050 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 DAZAP2Q15038 168 aaPredicted RBP13.73□□□□□ -0.21
RTN3-214ENST00000545432 MEI1Q5TIA1 1274 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 MRNIPQ6NTE8 343 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 SDCCAG8Q86SQ7 713 aaPredicted RBP13.73□□□□□ -0.21
RTN3-214ENST00000545432 ASPGQ86U10 573 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 CDC20BQ86Y33 519 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 TC2NQ8N9U0 490 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 OR5T3Q8NGG3 340 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 RMND5BQ96G75 393 aaPredicted RBP13.73□□□□□ -0.21
RTN3-214ENST00000545432 C18orf12Q96KH6 178 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 SLC30A3Q99726 388 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 DEFB126Q9BYW3 111 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 SLC6A16Q9GZN6 736 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 IL22Q9GZX6 179 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 PCBD2Q9H0N5 130 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 EIF2B3Q9NR50 452 aaKnown RBP13.73□□□□□ -0.21
RTN3-214ENST00000545432 PNPLA3Q9NST1 481 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 Q9UFV3 132 aa13.73□□□□□ -0.21
RTN3-214ENST00000545432 CHST10O43529 356 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 COILP38432 576 aaPredicted RBP13.72□□□□□ -0.21
RTN3-214ENST00000545432 NPY2RP49146 381 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 TERF2Q15554 542 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 SKOR2Q2VWA4 1001 aaPredicted RBP13.72□□□□□ -0.21
RTN3-214ENST00000545432 CAPN13Q6MZZ7 669 aaPredicted RBP13.72□□□□□ -0.21
RTN3-214ENST00000545432 NIPAL1Q6NVV3 410 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 B3GNT6Q6ZMB0 384 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 CENPUQ71F23 418 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 CYP4Z2PQ8N1L4 340 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 MFSD9Q8NBP5 474 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 OR4K1Q8NGD4 311 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 OR5M3Q8NGP4 307 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 GIMAP7Q8NHV1 300 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 CREB3L4Q8TEY5 395 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 MDFIQ99750 246 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 FRMD8P1Q9BZ68 369 aaPredicted RBP13.72□□□□□ -0.21
RTN3-214ENST00000545432 DEFB127Q9H1M4 99 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 RAB6BQ9NRW1 208 aa13.72□□□□□ -0.21
RTN3-214ENST00000545432 GRID2IPA4D2P6 1211 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 PINLYPA6NC86 204 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 A6NNC1 897 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 NPIPA2E9PIF3 369 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 NPIPA3F8WFD2 350 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 LIASO43766 372 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 ZBTB14O43829 449 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 ATE1O95260 518 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 VAPBO95292 243 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 ENO3P13929 434 aaPredicted RBP13.71□□□□□ -0.21
RTN3-214ENST00000545432 OGNP20774 298 aaKnown RBP13.71□□□□□ -0.21
RTN3-214ENST00000545432 ADH7P40394 386 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 KIR2DL3P43628 341 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 BTG2P78543 158 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 PWP1Q13610 501 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 HYAL4Q2M3T9 481 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 DEFB113Q30KQ7 82 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 ARMC3Q5W041 872 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 PAMR1Q6UXH9 720 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 STRA8Q7Z7C7 330 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 PRIMA1Q86XR5 153 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 KRTAP1-3Q8IUG1 177 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 GPALPP1Q8IXQ4 340 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 ZZZ3Q8IYH5 903 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 PRELID2Q8N945 189 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 ZNF740Q8NDX6 193 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 WFDC11Q8NEX6 87 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 B3GNT7Q8NFL0 401 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 ABHD11Q8NFV4 315 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 ZCCHC10Q8TBK6 192 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 MFSD3Q96ES6 412 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 PTCHD1Q96NR3 888 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 SMR3AQ99954 134 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 RBCK1Q9BYM8 510 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 TIMMDC1Q9NPL8 285 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 CCDC177Q9NQR7 707 aaPredicted RBP13.71□□□□□ -0.21
RTN3-214ENST00000545432 CRIM1Q9NZV1 1036 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 ZNF223Q9UK11 482 aaPredicted RBP13.71□□□□□ -0.21
RTN3-214ENST00000545432 DRG1Q9Y295 367 aaKnown RBP13.71□□□□□ -0.21
RTN3-214ENST00000545432 CRYL1Q9Y2S2 319 aa13.71□□□□□ -0.21
RTN3-214ENST00000545432 FIGNL2A6NMB9 653 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 MIF4GDA9UHW6 222 aaKnown RBP13.7□□□□□ -0.22
RTN3-214ENST00000545432 E7EVH7 732 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 AP3B1O00203 1094 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 PFDN6O15212 129 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 ITGA10O75578 1167 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 TUBB4AP04350 444 aa13.7□□□□□ -0.22
RTN3-214ENST00000545432 APRTP07741 180 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms