RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 LHPPQ9H008 270 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 EPN3Q9H201 632 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 L2HGDHQ9H9P8 463 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 CLK4Q9HAZ1 481 aaKnown RBP14.87□□□□□ -0.03
CCDC78-216ENST00000544996 ZNF160Q9HCG1 818 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 C19orf25Q9UFG5 118 aaPredicted RBP14.87□□□□□ -0.03
CCDC78-216ENST00000544996 ANGPTL3Q9Y5C1 460 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 BOD1L1Q8NFC6 3051 aa14.87□□□□□ -0.03
CCDC78-216ENST00000544996 ZNF462Q96JM2 2506 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 TLN1Q9Y490 2541 aaKnown RBP14.86□□□□□ -0.03
CCDC78-216ENST00000544996 K7EPI3 171 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 RIPK2O43353 540 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 JRKO75564 520 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 CLEC3AO75596 197 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 SNRPAP09012 282 aaKnown RBP14.86□□□□□ -0.03
CCDC78-216ENST00000544996 RBP1P09455 135 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 COX6A1P12074 109 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 EPB42P16452 691 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 JAK1P23458 1154 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 ALDH18A1P54886 795 aaKnown RBP14.86□□□□□ -0.03
CCDC78-216ENST00000544996 RAB8AP61006 207 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 EEF1A2Q05639 463 aaKnown RBP14.86□□□□□ -0.03
CCDC78-216ENST00000544996 CHIT1Q13231 466 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 DOC2AQ14183 400 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 TBCCQ15814 346 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 PFKFB4Q16877 469 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 TOR1AIP1Q5JTV8 583 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 AGAP7PQ5VUJ5 663 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 KBTBD2Q8IY47 623 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 EIF1ADQ8N9N8 165 aaKnown RBP14.86□□□□□ -0.03
CCDC78-216ENST00000544996 CREB3L4Q8TEY5 395 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 DCAKDQ8WVC6 231 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 UBE2E3Q969T4 207 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 ISL2Q96A47 359 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 TBC1D20Q96BZ9 403 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 WDR34Q96EX3 536 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 PEX11GQ96HA9 241 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 THOC3Q96J01 351 aaKnown RBP14.86□□□□□ -0.03
CCDC78-216ENST00000544996 FAR2Q96K12 515 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 AGAP4Q96P64 663 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 VN1R1Q9GZP7 353 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 ZNF552Q9H707 407 aaPredicted RBP14.86□□□□□ -0.03
CCDC78-216ENST00000544996 PRM3Q9NNZ6 103 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 RIC8BQ9NVN3 520 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 COPG2Q9UBF2 871 aa14.86□□□□□ -0.03
CCDC78-216ENST00000544996 SPTA1P02549 2419 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 PCSK5Q92824 1860 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 LOC102723996A0A087X1L8 192 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 A0A088AWK7 358 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 A0A1W2PQ72 361 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 LRIT2A6NDA9 550 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 TRIM49D1C9J1S8 452 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 CHST10O43529 356 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 FAM153BP0C7A2 387 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 COL6A2P12110 1019 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 ICAM2P13598 275 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 MTHFD2P13995 350 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 ZNF10P21506 573 aaPredicted RBP14.85□□□□□ -0.03
CCDC78-216ENST00000544996 MAGEA12P43365 314 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 AGTR2P50052 363 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 AP2B1P63010 937 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 HYAL2Q12891 473 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 TSNAXIP1Q2TAA8 658 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 FAM153CQ494X1 144 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 NADK2Q4G0N4 442 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 COLEC12Q5KU26 742 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 TEX35Q5T0J7 233 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 TMEM205Q6UW68 189 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 IGFL3Q6UXB1 125 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 CNPY4Q8N129 248 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 LRRN4CLQ8ND94 238 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 OR5T3Q8NGG3 340 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 MTBPQ96DY7 904 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 GPR78Q96P69 363 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 MESP1Q9BRJ9 268 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 TRIM4Q9C037 500 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 CPSF2Q9P2I0 782 aaKnown RBP14.85□□□□□ -0.03
CCDC78-216ENST00000544996 TMCO1Q9UM00 188 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 ASB1Q9Y576 335 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 TNPO3Q9Y5L0 923 aaKnown RBP14.85□□□□□ -0.03
CCDC78-216ENST00000544996 MDC1Q14676 2089 aaKnown RBP14.85□□□□□ -0.03
CCDC78-216ENST00000544996 ANKRD12Q6UB98 2062 aa14.85□□□□□ -0.03
CCDC78-216ENST00000544996 IGHV1-45A0A0A0MS14 117 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 TTLL8A6PVC2 850 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 PSMD12O00232 456 aaPredicted RBP14.84□□□□□ -0.03
CCDC78-216ENST00000544996 KLK8O60259 260 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 PRAMEF4O60810 478 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 FHP07954 510 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 SMIM10L1P0DMW3 83 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 EPORP19235 508 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 CASP2P42575 452 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 OLR1P78380 273 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 TGM3Q08188 693 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 NAA30Q147X3 362 aaPredicted RBP14.84□□□□□ -0.03
CCDC78-216ENST00000544996 SETDB1Q15047 1291 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 PRAMEF9Q5VWM5 478 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 JMJD6Q6NYC1 403 aaPredicted RBP14.84□□□□□ -0.03
CCDC78-216ENST00000544996 PLD6Q8N2A8 252 aaKnown RBP14.84□□□□□ -0.03
CCDC78-216ENST00000544996 ZADH2Q8N4Q0 377 aa14.84□□□□□ -0.03
CCDC78-216ENST00000544996 TEX9Q8N6V9 391 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms