RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 KERAO60938 352 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SUPT3HO75486 399 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 CLEC3AO75596 197 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 KLHL18O94889 574 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 KLHL2O95198 593 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 BMP10O95393 424 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 CRYABP02511 175 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SERPINA7P05543 415 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 FHP07954 510 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 FURINP09958 794 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 COX7A2P14406 83 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 NCF1P14598 390 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TFEBP19484 476 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TNFRSF8P28908 595 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 PPP2R1BP30154 601 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 GGT5P36269 586 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 ARL1P40616 181 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 HNF4AP41235 474 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TSFMP43897 325 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 GCGRP47871 477 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SCTRP47872 440 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 KCNC1P48547 511 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 ARFIP1P53367 373 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 ALDH18A1P54886 795 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 CASP6P55212 293 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TAS2R39P59534 338 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC7A5Q01650 507 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 IRF8Q02556 426 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 FASTKD3Q14CZ7 662 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 NSDHLQ15738 373 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 ZKSCAN8Q15776 578 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TBCCQ15814 346 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 PPP1R3AQ16821 1122 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 HKDC1Q2TB90 917 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 AP5B1Q2VPB7 878 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TMEM35AQ53FP2 167 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 XKR6Q5GH73 641 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 MROH9Q5TGP6 573 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 LIPJQ5W064 366 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 LCN10Q6JVE6 187 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TMEM214Q6NUQ4 689 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SBSNQ6UWP8 590 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 MICALCLQ6ZW33 695 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 CPEB2Q7Z5Q1 589 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TMPRSS11BQ86T26 416 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 LRRC56Q8IYG6 542 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 PRSS58Q8IYP2 241 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 EID3Q8N140 333 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC5A8Q8N695 610 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 METTL27Q8N6F8 245 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 FAM98AQ8NCA5 519 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 PDPRQ8NCN5 879 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 FDCSPQ8NFU4 85 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 OR11G2Q8NGC1 345 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 OR51Q1Q8NH59 317 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 M1APQ8TC57 530 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SREK1Q8WXA9 508 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 NEIL2Q969S2 332 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 GAL3ST3Q96A11 431 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 PYCR2Q96C36 320 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 RHBDF1Q96CC6 855 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TM4SF19Q96DZ7 209 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 UBXN10Q96LJ8 280 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 ZNF354BQ96LW1 612 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 C10orf90Q96M02 699 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 PWWP2AQ96N64 755 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 KCNC2Q96PR1 638 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SPSB2Q99619 263 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 OLFM1Q99784 485 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 LRRC1Q9BTT6 524 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 REXO4Q9GZR2 422 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 ACSS3Q9H6R3 686 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 WDR41Q9HAD4 459 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 CUEDC1Q9NWM3 386 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 AHSPQ9NZD4 102 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 CTSFQ9UBX1 484 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 ZNF180Q9UJW8 692 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 STK38LQ9Y2H1 464 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 MTO1Q9Y2Z2 717 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 NAALAD2Q9Y3Q0 740 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 PCDHGA11Q9Y5H2 935 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 PSAT1Q9Y617 370 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 ANKRD12Q6UB98 2062 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SVILO95425 2214 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 LOC102723996A0A087X1L8 192 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 EXOC1LA0A1B0GW35 172 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 MAGEB17A8MXT2 336 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 K7EPI3 171 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 SOCS6O14544 535 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 HCRTR1O43613 425 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 GALR3O60755 368 aaPredicted RBP5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 GUCY1B2O75343 617 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 DNAJB5O75953 348 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 ACSL3O95573 720 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 UMODP07911 640 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 SNRPAP09012 282 aaKnown RBP5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 PRR35P0CG20 571 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 CD1DP15813 335 aa5.3□□□□□ -1.56
CLSTN3-215ENST00000544584 IL1RNP18510 177 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms