RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 GPSM3Q9Y4H4 160 aa16.36■□□□□ 0.21
PTPRO-209ENST00000543886 A0A1W2PQF6 199 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 KCNJ13O60928 360 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 E2F6O75461 281 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 ALPLP05186 524 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 SERPINB1P30740 379 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 NR1H2P55055 460 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 REEP5Q00765 189 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 MC1RQ01726 317 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 CNPY1Q3B7I2 92 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 ZFP90Q8TF47 636 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 MTERF3Q96E29 417 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 DTNBP1Q96EV8 351 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 GDF15Q99988 308 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 EPB41L1Q9H4G0 881 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 SCML1Q9UN30 329 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 GMEB1Q9Y692 573 aa16.35■□□□□ 0.21
PTPRO-209ENST00000543886 A0A1B0GTW7 788 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 A0A1W2PPV9 198 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 ANHXE9PGG2 379 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 H0YAE9 185 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 SLC31A1O15431 190 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 SEC24DO94855 1032 aaPredicted RBP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 SEMA3DO95025 777 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 NTRK1P04629 796 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 THRBP10828 461 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 IST1P53990 364 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 RGNQ15493 299 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 MLF2Q15773 248 aaPredicted RBP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 CCNYL2Q5T2Q4 361 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 KHDRBS2Q5VWX1 349 aaKnown RBP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 ANGPTL8Q6UXH0 198 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 ZDHHC21Q8IVQ6 265 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 SYNPOQ8N3V7 929 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 TRIML2Q8N7C3 387 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 OR10Q1Q8NGQ4 319 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 CAMK1GQ96NX5 476 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 SORBS1Q9BX66 1292 aaKnown RBP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 RAB11FIP5Q9BXF6 653 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 PITHD1Q9GZP4 211 aaPredicted RBP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 MIEF1Q9NQG6 463 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 NCKAP1Q9Y2A7 1128 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 MAGED1Q9Y5V3 778 aaPredicted RBP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 PDZK1P1A8MUH7 402 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 H7BY64 318 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 CLIC3O95833 236 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 C6orf47O95873 294 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 IL3P08700 152 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 KDELR2P33947 212 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 RAB28P51157 221 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 VEZF1Q14119 521 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 SPIDRQ14159 915 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 MYBPC3Q14896 1274 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 NADK2Q4G0N4 442 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 KCTD21Q4G0X4 260 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 SPESP1Q6UW49 350 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 ABRAXAS1Q6UWZ7 409 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 PATL1Q86TB9 770 aaKnown RBP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 FAM124AQ86V42 546 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 OFCC1Q8IZS5 231 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 METTL25Q8N6Q8 603 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 LINC01555Q8NAE3 123 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 OR5K1Q8NHB7 308 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 GOT1L1Q8NHS2 421 aaPredicted RBP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 CIDECQ96AQ7 238 aaPredicted RBP16.34■□□□□ 0.21
PTPRO-209ENST00000543886 SIPA1Q96FS4 1042 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 NECTIN4Q96NY8 510 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 PRAP1Q96NZ9 151 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 MS4A8Q9BY19 250 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 PLEKHM1Q9Y4G2 1056 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 COMMD3-BMI1R4GMX3 469 aa16.34■□□□□ 0.21
PTPRO-209ENST00000543886 FEZF1A0PJY2 475 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 GPR37L1O60883 481 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 KLHL18O94889 574 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 RPS6KA3P51812 740 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 PPP2CBP62714 309 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 PPP2CAP67775 309 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 HBA1P69905 142 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 ADARB1P78563 741 aaKnown RBP16.33■□□□□ 0.21
PTPRO-209ENST00000543886 CTBSQ01459 385 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 GRSF1Q12849 480 aaKnown RBP eCLIP16.33■□□□□ 0.21
PTPRO-209ENST00000543886 ZIK1Q3SY52 487 aaPredicted RBP16.33■□□□□ 0.21
PTPRO-209ENST00000543886 PAGE2Q7Z2X7 111 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 ANKRD53Q8N9V6 530 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 RDH12Q96NR8 316 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 RBM4BQ9BQ04 359 aaKnown RBP16.33■□□□□ 0.21
PTPRO-209ENST00000543886 SLC35A5Q9BS91 424 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 RBM4Q9BWF3 364 aaKnown RBP16.33■□□□□ 0.21
PTPRO-209ENST00000543886 ASPSCR1Q9BZE9 553 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 CHST8Q9H2A9 424 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 SOX17Q9H6I2 414 aaPredicted RBP16.33■□□□□ 0.21
PTPRO-209ENST00000543886 NT5DC2Q9H857 520 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 FAF1Q9UNN5 650 aaPredicted RBP16.33■□□□□ 0.21
PTPRO-209ENST00000543886 PIAS3Q9Y6X2 628 aa16.33■□□□□ 0.21
PTPRO-209ENST00000543886 PLPP1O14494 284 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 ACADMP11310 421 aa16.33■□□□□ 0.2
PTPRO-209ENST00000543886 TPP2P29144 1249 aaPredicted RBP16.33■□□□□ 0.2
PTPRO-209ENST00000543886 MAGEA2P43356 314 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms