RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 CXCR5P32302 372 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 SP140Q13342 867 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 NIPAL1Q6NVV3 410 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 C3P1Q6ZMU1 363 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 CYP4X1Q8N118 509 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 CPSF7Q8N684 471 aaKnown RBP21.21■□□□□ 0.99
CDKN3-207ENST00000543789 CA5BP1Q8WTZ4 195 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 TMEM125Q96AQ2 219 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 HIST1H2AHQ96KK5 128 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 DMRTA2Q96SC8 542 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 NDNQ99608 321 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 HIST1H2AJQ99878 128 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 H2AFJQ9BTM1 129 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 SARGQ9BW04 601 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 ENKD1Q9H0I2 346 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 TRIM45Q9H8W5 580 aaPredicted RBP21.21■□□□□ 0.99
CDKN3-207ENST00000543789 LZTFL1Q9NQ48 299 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 ASB1Q9Y576 335 aa21.21■□□□□ 0.99
CDKN3-207ENST00000543789 ADAM10O14672 748 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 MLF1P58340 268 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 TIAL1Q01085 375 aaKnown RBP eCLIP21.2■□□□□ 0.98
CDKN3-207ENST00000543789 MEF2AQ02078 507 aaPredicted RBP21.2■□□□□ 0.98
CDKN3-207ENST00000543789 DEFB134Q4QY38 66 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 PAQR3Q6TCH7 311 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 MYO1HQ8N1T3 1032 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 OR4K1Q8NGD4 311 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 SDCCAG3Q96C92 435 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 SNF8Q96H20 258 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 PTCHD1Q96NR3 888 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 FAM167BQ9BTA0 163 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 IARS2Q9NSE4 1012 aaKnown RBP21.2■□□□□ 0.98
CDKN3-207ENST00000543789 TAS2R13Q9NYV9 303 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 PPT2Q9UMR5 302 aa21.2■□□□□ 0.98
CDKN3-207ENST00000543789 DCHS2Q6V1P9 2916 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 SCN2AQ99250 2005 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 PRMT3O60678 531 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 SERPIND1P05546 499 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 TRHRP34981 398 aaPredicted RBP21.19■□□□□ 0.98
CDKN3-207ENST00000543789 HLCSP50747 726 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 OLR1P78380 273 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 TLE4Q04727 773 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 RGS1Q08116 209 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 TESK1Q15569 626 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 PHKG1Q16816 387 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 DUPD1Q68J44 220 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 TTC27Q6P3X3 843 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 FGD2Q7Z6J4 655 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 STRA8Q7Z7C7 330 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 ZNF227Q86WZ6 799 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 AGGF1Q8N302 714 aaeCLIP21.19■□□□□ 0.98
CDKN3-207ENST00000543789 TBC1D19Q8N5T2 526 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 POGLUT1Q8NBL1 392 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 ACBD4Q8NC06 268 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 MAGOHBQ96A72 148 aaKnown RBP21.19■□□□□ 0.98
CDKN3-207ENST00000543789 SIGLEC10Q96LC7 697 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 MCCC2Q9HCC0 563 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 COQ3Q9NZJ6 369 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 AKAP9Q99996 3911 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 CCDC168Q8NDH2 2452 aa21.19■□□□□ 0.98
CDKN3-207ENST00000543789 TRBC2A0A5B9 178 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 GOLGA6L6A8MZA4 724 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 B3GALT4O96024 378 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 MAGEA3P43357 314 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 ITGA8P53708 1063 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 BTG2P78543 158 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 DHX9Q08211 1270 aaKnown RBP21.18■□□□□ 0.98
CDKN3-207ENST00000543789 MEX3BQ6ZN04 569 aaKnown RBP21.18■□□□□ 0.98
CDKN3-207ENST00000543789 QSOX2Q6ZRP7 698 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 ZNF662Q6ZS27 426 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 ABHD13Q7L211 337 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 GAS2L3Q86XJ1 694 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.18■□□□□ 0.98
CDKN3-207ENST00000543789 C2CD4AQ8NCU7 369 aaPredicted RBP21.18■□□□□ 0.98
CDKN3-207ENST00000543789 TRIM58Q8NG06 486 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 PYCR2Q96C36 320 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 ARL15Q9NXU5 204 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 C2CD3Q4AC94 2353 aa21.18■□□□□ 0.98
CDKN3-207ENST00000543789 SAGE2PA6NJ88 616 aa21.17■□□□□ 0.98
CDKN3-207ENST00000543789 ZNF888P0CJ79 500 aaPredicted RBP21.17■□□□□ 0.98
CDKN3-207ENST00000543789 PTGER1P34995 402 aa21.17■□□□□ 0.98
CDKN3-207ENST00000543789 PTGS2P35354 604 aa21.17■□□□□ 0.98
CDKN3-207ENST00000543789 CDH24Q86UP0 819 aa21.17■□□□□ 0.98
CDKN3-207ENST00000543789 OR56A3Q8NH54 315 aa21.17■□□□□ 0.98
CDKN3-207ENST00000543789 NT5CQ8TCD5 201 aa21.17■□□□□ 0.98
CDKN3-207ENST00000543789 LINGO1Q96FE5 620 aa21.17■□□□□ 0.98
CDKN3-207ENST00000543789 OR4K3Q96R72 315 aa21.17■□□□□ 0.98
CDKN3-207ENST00000543789 DEFB126Q9BYW3 111 aa21.17■□□□□ 0.98
CDKN3-207ENST00000543789 CLK4Q9HAZ1 481 aaKnown RBP21.17■□□□□ 0.98
CDKN3-207ENST00000543789 KLF13Q9Y2Y9 288 aaPredicted RBP21.17■□□□□ 0.98
CDKN3-207ENST00000543789 NCOA6Q14686 2063 aaPredicted RBP21.17■□□□□ 0.98
CDKN3-207ENST00000543789 PABPN1LA6NDY0 278 aaKnown RBP21.16■□□□□ 0.98
CDKN3-207ENST00000543789 KLRC4-KLRK1H3BQV0 150 aa21.16■□□□□ 0.98
CDKN3-207ENST00000543789 FCHO1O14526 889 aa21.16■□□□□ 0.98
CDKN3-207ENST00000543789 TFECO14948 347 aaPredicted RBP21.16■□□□□ 0.98
CDKN3-207ENST00000543789 CDKN2DP55273 166 aa21.16■□□□□ 0.98
CDKN3-207ENST00000543789 CATSPEREQ5SY80 951 aa21.16■□□□□ 0.98
CDKN3-207ENST00000543789 SPNS3Q6ZMD2 512 aa21.16■□□□□ 0.98
CDKN3-207ENST00000543789 SULF2Q8IWU5 870 aa21.16■□□□□ 0.98
CDKN3-207ENST00000543789 NFAM1Q8NET5 270 aaPredicted RBP21.16■□□□□ 0.98
CDKN3-207ENST00000543789 FAM57AQ8TBR7 257 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms