RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TUBB1Q9H4B7 451 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 POLR1BQ9H9Y6 1135 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 APMAPQ9HDC9 416 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 PCDHB3Q9Y5E6 796 aa22■■□□□ 1.11
HOMER3-205ENST00000542541 ZNF749O43361 778 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 SCRG1O75711 98 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 TGDSO95455 350 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 TBX6O95947 436 aaPredicted RBP21.99■■□□□ 1.11
HOMER3-205ENST00000542541 LSP1P33241 339 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 ARFIP1P53367 373 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 PWWP2BQ6NUJ5 590 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 NIPAL1Q6NVV3 410 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 TRIM40Q6P9F5 258 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 OR2L5Q8NG80 312 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 GAL3ST3Q96A11 431 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 RGMAQ96B86 450 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 MS4A6EQ96DS6 147 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 C19orf60Q96EN9 201 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 ZNF317Q96PQ6 595 aaPredicted RBP21.99■■□□□ 1.11
HOMER3-205ENST00000542541 CTRCQ99895 268 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 ACPTQ9BZG2 426 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 B3GNT4Q9C0J1 378 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 RIC8BQ9NVN3 520 aa21.99■■□□□ 1.11
HOMER3-205ENST00000542541 HYAL3O43820 417 aaPredicted RBP21.98■■□□□ 1.11
HOMER3-205ENST00000542541 SEMA3DO95025 777 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 HNRNPH1P31943 449 aaKnown RBP21.98■■□□□ 1.11
HOMER3-205ENST00000542541 RAP1GDS1P52306 607 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 SKP1P63208 163 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 BTKQ06187 659 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 FAM53BQ14153 422 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 HERC3Q15034 1050 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 FAM219BQ5XKK7 198 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 NUF2Q9BZD4 464 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 CUTCQ9NTM9 273 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 FGFR1OP2Q9NVK5 253 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 ADAM21Q9UKJ8 722 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 PCDHGA3Q9Y5H0 932 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 USH1CQ9Y6N9 552 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 A0A088AWK7 358 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 A0A1W2PNU3 283 aaPredicted RBP21.98■■□□□ 1.11
HOMER3-205ENST00000542541 ERI3O43414 337 aaKnown RBP21.98■■□□□ 1.11
HOMER3-205ENST00000542541 SH3BGRLO75368 114 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 RSL1D1O76021 490 aaKnown RBP21.98■■□□□ 1.11
HOMER3-205ENST00000542541 ALOX12P18054 663 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 ZNF10P21506 573 aaPredicted RBP21.98■■□□□ 1.11
HOMER3-205ENST00000542541 ETV5P41161 510 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 FOXC1Q12948 553 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 SPDYAQ5MJ70 313 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 LRRC34Q8IZ02 419 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 UTP15Q8TED0 518 aaKnown RBP21.98■■□□□ 1.11
HOMER3-205ENST00000542541 KCNC2Q96PR1 638 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 SIKE1Q9BRV8 207 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 TBCDQ9BTW9 1192 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 TRIM55Q9BYV6 548 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 ROGDIQ9GZN7 287 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 KLHL31Q9H511 634 aa21.98■■□□□ 1.11
HOMER3-205ENST00000542541 ACTR5Q9H9F9 607 aaPredicted RBP21.98■■□□□ 1.11
HOMER3-205ENST00000542541 MDC1Q14676 2089 aaKnown RBP21.97■■□□□ 1.11
HOMER3-205ENST00000542541 VPS4BO75351 444 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 ETHE1O95571 254 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 TROVE2P10155 538 aaKnown RBP eCLIP21.97■■□□□ 1.11
HOMER3-205ENST00000542541 TSFMP43897 325 aaKnown RBP21.97■■□□□ 1.11
HOMER3-205ENST00000542541 PLA2G16P53816 162 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 HMGCS1Q01581 520 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 XKR7Q5GH72 579 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 DGLUCYQ7Z3D6 616 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 ZCCHC10Q8TBK6 192 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 MVB12AQ96EY5 273 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 METTL2AQ96IZ6 378 aaKnown RBP21.97■■□□□ 1.11
HOMER3-205ENST00000542541 NRSN2Q9GZP1 204 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 MEAF6Q9HAF1 191 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 ANKHQ9HCJ1 492 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 TXLNGQ9NUQ3 528 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 CDC14AQ9UNH5 594 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 PTGDR2Q9Y5Y4 395 aa21.97■■□□□ 1.11
HOMER3-205ENST00000542541 GMNCA6NCL1 334 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 NPIPB8E9PQR5 432 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 TNFSF15O95150 251 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 ZNF888P0CJ79 500 aaPredicted RBP21.96■■□□□ 1.11
HOMER3-205ENST00000542541 PRPH2P23942 346 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 RBMS1P29558 406 aaKnown RBP21.96■■□□□ 1.11
HOMER3-205ENST00000542541 GABREP78334 506 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 NR6A1Q15406 480 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 AP5B1Q2VPB7 878 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 RHBDD2Q6NTF9 364 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 ABHD17CQ6PCB6 329 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 Q6ZSR9 355 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 TTLL10Q6ZVT0 673 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 MARCH9Q86YJ5 346 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 ARHGEF39Q8N4T4 335 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 CLIP3Q96DZ5 547 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 PPP3R2Q96LZ3 170 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 CCL27Q9Y4X3 112 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 B3GALT1Q9Y5Z6 326 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 PTPRBP23467 1997 aa21.96■■□□□ 1.11
HOMER3-205ENST00000542541 SAP18O00422 153 aaKnown RBP21.95■■□□□ 1.1
HOMER3-205ENST00000542541 CPNE3O75131 537 aaKnown RBP21.95■■□□□ 1.1
HOMER3-205ENST00000542541 JUNP05412 331 aaKnown RBP21.95■■□□□ 1.1
HOMER3-205ENST00000542541 SMIM10L1P0DMW3 83 aa21.95■■□□□ 1.1
HOMER3-205ENST00000542541 ALAS2P22557 587 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms