RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 ZNF292O60281 2723 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 LMNAP02545 664 aaKnown RBP16.42■□□□□ 0.22
GTDC1-219ENST00000542155 TPP2P29144 1249 aaPredicted RBP16.42■□□□□ 0.22
GTDC1-219ENST00000542155 VSX2P58304 361 aaPredicted RBP16.42■□□□□ 0.22
GTDC1-219ENST00000542155 RAB8AP61006 207 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 PHEXP78562 749 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 RPS6KA2Q15349 733 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 TOR1AIP1Q5JTV8 583 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 WDR74Q6RFH5 385 aaPredicted RBP16.42■□□□□ 0.22
GTDC1-219ENST00000542155 CCDC121Q6ZUS5 278 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 ASPGQ86U10 573 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 SNX32Q86XE0 403 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 PLXDC1Q8IUK5 500 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 HOMEZQ8IX15 550 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 PRRX2Q99811 253 aa16.42■□□□□ 0.22
GTDC1-219ENST00000542155 MN1Q10571 1320 aaPredicted RBP16.42■□□□□ 0.22
GTDC1-219ENST00000542155 LRATO95237 230 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 COX4I1P13073 169 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 RELAQ04206 551 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 PDCD4Q53EL6 469 aaKnown RBP16.41■□□□□ 0.22
GTDC1-219ENST00000542155 SPIN4Q56A73 249 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 GALNT18Q6P9A2 607 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 MCATQ8IVS2 390 aaKnown RBP16.41■□□□□ 0.22
GTDC1-219ENST00000542155 DTWD1Q8N5C7 304 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 NSL1Q96IY1 281 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 TMEM74Q96NL1 305 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 PHOX2BQ99453 314 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 ZMYND15Q9H091 742 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 LRRN3Q9H3W5 708 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 EPB41L1Q9H4G0 881 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 RUVBL1Q9Y265 456 aaKnown RBP16.41■□□□□ 0.22
GTDC1-219ENST00000542155 TMED5Q9Y3A6 229 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 ARHGAP10A1A4S6 786 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 C4orf47A7E2U8 309 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 LDOC1O95751 146 aaPredicted RBP16.41■□□□□ 0.22
GTDC1-219ENST00000542155 ANXA4P09525 319 aaPredicted RBP16.41■□□□□ 0.22
GTDC1-219ENST00000542155 SERPINB1P30740 379 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 TIA1P31483 386 aaKnown RBP eCLIP16.41■□□□□ 0.22
GTDC1-219ENST00000542155 STX1BP61266 288 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 MMP21Q8N119 569 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 NAT6Q93015 286 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 TCTN2Q96GX1 697 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 PRDM7Q9NQW5 492 aa16.41■□□□□ 0.22
GTDC1-219ENST00000542155 EXO1Q9UQ84 846 aaKnown RBP16.41■□□□□ 0.22
GTDC1-219ENST00000542155 PCNX2A6NKB5 2137 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 ERI3O43414 337 aaKnown RBP16.4■□□□□ 0.22
GTDC1-219ENST00000542155 PCDH7O60245 1069 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 DNAJB6O75190 326 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 SLC22A3O75751 556 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 MRPL19P49406 292 aaKnown RBP16.4■□□□□ 0.22
GTDC1-219ENST00000542155 MAD2L1Q13257 205 aaPredicted RBP16.4■□□□□ 0.22
GTDC1-219ENST00000542155 SQSTM1Q13501 440 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 CSRP2Q16527 193 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 TBC1D19Q8N5T2 526 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 RCBTB1Q8NDN9 531 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 NT5CQ8TCD5 201 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 SLC7A6OSQ96CW6 309 aaPredicted RBP16.4■□□□□ 0.22
GTDC1-219ENST00000542155 SYNDIG1Q9H7V2 258 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 SOHLH2Q9NX45 425 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 SIRT5Q9NXA8 310 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 NCDNQ9UBB6 729 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 CFAP54Q96N23 3096 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 FLRT2O43155 660 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 TMPRSS11DO60235 418 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 MED26O95402 600 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 CKMT2P17540 419 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 CAPN3P20807 821 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 TMEM71Q6P5X7 295 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 ABHD17CQ6PCB6 329 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 PRSS41Q7RTY9 318 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.4■□□□□ 0.22
GTDC1-219ENST00000542155 VPS33AQ96AX1 596 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 RGMAQ96B86 450 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 TMEM9BQ9NQ34 198 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 NMRK1Q9NWW6 199 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 SEMA5BQ9P283 1151 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 TAGLN3Q9UI15 199 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 HCN4Q9Y3Q4 1203 aa16.4■□□□□ 0.22
GTDC1-219ENST00000542155 CROCCQ5TZA2 2017 aa16.39■□□□□ 0.22
GTDC1-219ENST00000542155 NUP214P35658 2090 aaPredicted RBP16.39■□□□□ 0.21
GTDC1-219ENST00000542155 SCN2AQ99250 2005 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 FBP2O00757 339 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 AKAP10O43572 662 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 CBFA2T3O75081 653 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 ZBTB11O95625 1053 aaPredicted RBP16.39■□□□□ 0.21
GTDC1-219ENST00000542155 CPNE6O95741 557 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 ZNF888P0CJ79 500 aaPredicted RBP16.39■□□□□ 0.21
GTDC1-219ENST00000542155 DGKQP52824 942 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 MC1RQ01726 317 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 PWP1Q13610 501 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 VPS26BQ4G0F5 336 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 LACTB2Q53H82 288 aaPredicted RBP16.39■□□□□ 0.21
GTDC1-219ENST00000542155 OR4C11Q6IEV9 310 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 BLOC1S3Q6QNY0 202 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 RINLQ6ZS11 566 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 OR8K5Q8NH50 307 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 CDC26Q8NHZ8 85 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 ZCCHC10Q8TBK6 192 aa16.39■□□□□ 0.21
GTDC1-219ENST00000542155 UTP15Q8TED0 518 aaKnown RBP16.39■□□□□ 0.21
GTDC1-219ENST00000542155 UCN3Q969E3 161 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms