RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 SPAG4Q9NPE6 437 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 FZD3Q9NPG1 666 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 AIG1Q9NVV5 245 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 SPATA7Q9P0W8 599 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 TMPRSS11EQ9UL52 423 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 DYRK1BQ9Y463 629 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 PRRC2AP48634 2157 aaKnown RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 A0A0U1RQS6 177 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 A0A1W2PP18 115 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 IGLON5A6NGN9 336 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 OR2AG2A6NM03 316 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 TMEM233B4DJY2 109 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 MANBAO00462 879 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 INPP4BO15327 924 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 SLC31A1O15431 190 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 TAPBPO15533 448 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 WIPF1O43516 503 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 SGTAO43765 313 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 RNGTTO60942 597 aaKnown RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 GMNNO75496 209 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 OR4F21O95013 312 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 IL6P05231 212 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 SLC35G4P0C7Q5 338 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 LINC00032P0C843 101 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 MYCLP1P12525 358 aaPredicted RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 ME2P23368 584 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 CD82P27701 267 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 GCKP35557 465 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 TRIM23P36406 574 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 CPOXP36551 454 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 RPL3P39023 403 aaKnown RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 SLC6A12P48065 614 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 MTTPP55157 894 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 YPEL5P62699 121 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 CDK3Q00526 305 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 DMPKQ09013 629 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 TRAP1Q12931 704 aaKnown RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 BNIP2Q12982 314 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 TRAF3Q13114 568 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 LRP8Q14114 963 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 FGL2Q14314 439 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 PHKG1Q16816 387 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 LRRC73Q5JTD7 316 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 C6orf136Q5SQH8 315 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 AGBL4Q5VU57 503 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 FBXW10Q5XX13 1052 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 AGTRAPQ6RW13 159 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 MSANTD1Q6ZTZ1 278 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 CXXC5Q7LFL8 322 aaKnown RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 HORMAD1Q86X24 394 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 DCUN1D3Q8IWE4 304 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 CFAP206Q8IYR0 622 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 ZNF295-AS1Q8N0V1 137 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 SDR16C5Q8N3Y7 309 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 FNDC5Q8NAU1 212 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 OR9A1PQ8NGU1 263 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 WDR48Q8TAF3 677 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 LKAAEAR1Q8TD35 194 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 PRPF18Q99633 342 aaKnown RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 TACO1Q9BSH4 297 aaKnown RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 SLC17A9Q9BYT1 436 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 SEMA6CQ9H3T2 930 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 RUBCNLQ9H714 662 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 WDR41Q9HAD4 459 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 BRF2Q9HAW0 419 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 C1orf109Q9NX04 203 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 MAP10Q9P2G4 905 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 LEF1Q9UJU2 399 aaPredicted RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 CROTQ9UKG9 612 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 ADAMTS6Q9UKP5 1117 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 CNOT6Q9ULM6 557 aaKnown RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 PADI4Q9UM07 663 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 WBP11Q9Y2W2 641 aaKnown RBP8.03□□□□□ -1.12
CHD4-208ENST00000540960 TSC22D4Q9Y3Q8 395 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 POLEQ07864 2286 aa8.03□□□□□ -1.12
CHD4-208ENST00000540960 CCDC154A6NI56 674 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 TMEM200CA6NKL6 621 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 PRAMEF26H0Y7S4 382 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 H0YIV9 168 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 MKRN2OSH3BPM6 223 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 TMX2-CTNND1H3BSU7 103 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 OR7A17O14581 309 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 FPGTO14772 594 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 TNFRSF10CO14798 259 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 MRASO14807 208 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 GPR39O43194 453 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 PEX11AO75192 247 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 RPLP0P05388 317 aaKnown RBP8.02□□□□□ -1.13
CHD4-208ENST00000540960 TSPAN8P19075 237 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 ITGAXP20702 1163 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 IDSP22304 550 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 GPX3P22352 226 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 JAK1P23458 1154 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 HRH2P25021 359 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 GSTM2P28161 218 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 AKT2P31751 481 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 DRD3P35462 400 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 HALP42357 657 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 ASMTP46597 345 aa8.02□□□□□ -1.13
CHD4-208ENST00000540960 CPA2P48052 419 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms