RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 TTLQ8NG68 377 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 ZCCHC10Q8TBK6 192 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 TCP10LQ8TDR4 215 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 KIAA1143Q96AT1 154 aaPredicted RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 FKBP10Q96AY3 582 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 SLC45A3Q96JT2 553 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 CDK15Q96Q40 435 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 CCNL2Q96S94 520 aaPredicted RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 NTMT1Q9BV86 223 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 REPIN1Q9BWE0 567 aaKnown RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 AICDAQ9GZX7 198 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 DRC3Q9H069 523 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 STMN4Q9H169 189 aaPredicted RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 SLC26A1Q9H2B4 701 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 RHBGQ9H310 441 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 CENPHQ9H3R5 247 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 GSTO2Q9H4Y5 243 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 NOL11Q9H8H0 719 aaKnown RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 ACTR8Q9H981 624 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 GPN2Q9H9Y4 310 aaPredicted RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 TMBIM4Q9HC24 238 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 NPDC1Q9NQX5 325 aaPredicted RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 ACSS2Q9NR19 701 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 OXSMQ9NWU1 459 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 CTSFQ9UBX1 484 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 NDOR1Q9UHB4 597 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 IL17BQ9UHF5 180 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 MID2Q9UJV3 735 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF225Q9UK10 706 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF490Q9ULM2 529 aaPredicted RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 RNF11Q9Y3C5 154 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 TSC22D4Q9Y3Q8 395 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 MRPS18BQ9Y676 258 aaKnown RBP6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 SLC22A7Q9Y694 548 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 CHD6Q8TD26 2715 aa6.63□□□□□ -1.35
LPCAT3-209ENST00000540060 BOD1L1Q8NFC6 3051 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 IGLV3-12A0A075B6K2 115 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 A0A0A6YYC8 382 aaPredicted RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 ANKDD1BA6NHY2 528 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 GOLGA6L10A6NI86 522 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 C9J4A7 227 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 H0YIV9 168 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 I3L1I5 382 aaPredicted RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 PPP6CO00743 305 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 TM9SF1O15321 606 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 PRPF4O43172 522 aaKnown RBP eCLIP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 EFSO43281 561 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 CNOT3O75175 753 aaKnown RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 CLEC3AO75596 197 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 KLF7O75840 302 aaPredicted RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 NSA2O95478 260 aaKnown RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 CLDN9O95484 217 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 OTCP00480 354 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 SERPIND1P05546 499 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 SERPINA6P08185 405 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 RAB40ALP0C0E4 278 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF888P0CJ79 500 aaPredicted RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 TSPAN8P19075 237 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 FBLP22087 321 aaKnown RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 ALAS2P22557 587 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 SERPINB1P30740 379 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 OR1D4P47884 311 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 GSK3AP49840 483 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 CDH13P55290 713 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 DNAJB13P59910 316 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 RPS18P62269 152 aaKnown RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 LCP2Q13094 533 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 HERC3Q15034 1050 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 RBBP7Q16576 425 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 CPSF6Q16630 551 aaKnown RBP eCLIP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 HIST2H2ACQ16777 129 aaPredicted RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 NDUFA9Q16795 377 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 TOR1AIP1Q5JTV8 583 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 ARHGAP40Q5TG30 622 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 BROXQ5VW32 411 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 LIPMQ5VYY2 423 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 FAM219BQ5XKK7 198 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 HIST2H2AA3Q6FI13 130 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 LETMD1Q6P1Q0 360 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 ABHD13Q7L211 337 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 LAPTM4BQ86VI4 370 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 MYLK4Q86YV6 388 aaPredicted RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 C10orf107Q8IVU9 208 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 RNF175Q8N4F7 328 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 OR7G3Q8NG95 312 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 OR4F6Q8NGB9 312 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 OR9A4Q8NGU2 314 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 WDR20Q8TBZ3 569 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 UTP15Q8TED0 518 aaKnown RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 TRPC4APQ8TEL6 797 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 PPP4R1Q8TF05 950 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 AGAP11Q8TF27 550 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF473Q8WTR7 871 aaKnown RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 SNRNP27Q8WVK2 155 aaKnown RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 STARD8Q92502 1023 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 UBE2E3Q969T4 207 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 GAL3ST3Q96A11 431 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 TLCD1Q96CP7 247 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 MS4A6EQ96DS6 147 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms