RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CCDC80Q76M96 950 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 RNF180Q86T96 592 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 NPAS4Q8IUM7 802 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 LGI4Q8N135 537 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 CYP4Z2PQ8N1L4 340 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 B3GNT7Q8NFL0 401 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ZNF461Q8TAF7 563 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ECHDC3Q96DC8 303 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 Q96MT0 163 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 NIPSNAP1Q9BPW8 284 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 MS4A12Q9NXJ0 267 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 CNOT2Q9NZN8 540 aaKnown RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 NPAP1Q9NZP6 1156 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 DUSP12Q9UNI6 340 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 TRAPPC4Q9Y296 219 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 A0A075B6Q4 140 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 KRT87PA6NCN2 255 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 A8MU76 341 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 FAM47E-STBD1D6RA91 191 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 RGS13O14921 159 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 KIAA0513O60268 411 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 DNTTP04053 509 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 POLR2EP19388 210 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 MAGP20916 626 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 LHCGRP22888 699 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 RCVRNP35243 200 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 BMPR1AP36894 532 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CRISP3P54108 245 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CDH12P55289 794 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 SNRPD1P62314 119 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 SPIBQ01892 262 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDH13-204ENST00000539548 RBBP4Q09028 425 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 DDX39BQ13838 428 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 TIMM50Q3ZCQ8 353 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 AGAP6Q5VW22 663 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 TMEM150AQ86TG1 271 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 MMAAQ8IVH4 418 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 KLHDC8AQ8IYD2 350 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 C1orf52Q8N6N3 182 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 FLCNQ8NFG4 579 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 DBF4BQ8NFT6 615 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 OR4A15Q8NGL6 344 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 UTP15Q8TED0 518 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 CLP1Q92989 425 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 BHMTQ93088 406 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CXorf40BQ96DE9 158 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 AGAP4Q96P64 663 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 SLC22A12Q96S37 553 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 SDHCQ99643 169 aaPredicted RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 MAPKAP1Q9BPZ7 522 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CCM2Q9BSQ5 444 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CCDC32Q9BV29 185 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 MRPL9Q9BYD2 267 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 NUAK2Q9H093 628 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 MIR1-1HGQ9H1L0 117 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 SUV39H2Q9H5I1 410 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 ZNF556Q9HAH1 456 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 IMPAD1Q9NX62 359 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 FBXL12Q9NXK8 326 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 ENOPH1Q9UHY7 261 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 ATP6V1HQ9UI12 483 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CFL2Q9Y281 166 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CAB39Q9Y376 341 aaPredicted RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 CFAP20Q9Y6A4 193 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 KIAA1671Q9BY89 1806 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 MGAT4DA6NG13 374 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 PRAMEF25A6NGN4 478 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 E7EQ34 232 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 ZW10O43264 779 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 HOXA2O43364 376 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 MPZL2O60487 215 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 SLCO2B1O94956 709 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 ETHE1O95571 254 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 C1SP09871 688 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 ZNF24P17028 368 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 TNFRSF1BP20333 461 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CHMP24386 653 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CRATP43155 626 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 NR4A2P43354 598 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 LIMS1P48059 325 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 GJA8P48165 433 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 ALDH9A1P49189 494 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 SPINT3P49223 89 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 LMAN2Q12907 356 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 SPIN4Q56A73 249 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 SERPINA13PQ6UXR4 307 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 ATCAYQ86WG3 371 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CRIPAKQ8N1N5 446 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 OR52J3Q8NH60 311 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 MGLLQ99685 303 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 BHLHE41Q9C0J9 482 aaPredicted RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 SGK2Q9HBY8 427 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 NEK6Q9HC98 313 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 ACER3Q9NUN7 267 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 GPATCH2Q9NW75 528 aa9.29□□□□□ -0.92
CDH13-204ENST00000539548 CRNNQ9UBG3 495 aaPredicted RBP9.29□□□□□ -0.92
CDH13-204ENST00000539548 HCN4Q9Y3Q4 1203 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms