RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 ZDHHC18Q9NUE0 388 aa5.72□□□□□ -1.49
TRAV11-201ENST00000539512 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.72□□□□□ -1.49
TRAV11-201ENST00000539512 TRPC4Q9UBN4 977 aa5.72□□□□□ -1.49
TRAV11-201ENST00000539512 DBF4Q9UBU7 674 aaPredicted RBP5.72□□□□□ -1.49
TRAV11-201ENST00000539512 ERRFI1Q9UJM3 462 aaPredicted RBP5.72□□□□□ -1.49
TRAV11-201ENST00000539512 PFASO15067 1338 aa5.72□□□□□ -1.49
TRAV11-201ENST00000539512 MTMR11A4FU01 709 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 NKX6-3A6NJ46 265 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 SAP30O75446 220 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 LETM1O95202 739 aaPredicted RBP5.71□□□□□ -1.5
TRAV11-201ENST00000539512 OR3A1P47881 315 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 SLC3A1Q07837 685 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 MORF4L2Q15014 288 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 FAM106AQ4KMX7 169 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 TRMT11Q7Z4G4 463 aaKnown RBP5.71□□□□□ -1.5
TRAV11-201ENST00000539512 AQP12AQ8IXF9 295 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 ZNF444Q8N0Y2 327 aaPredicted RBP5.71□□□□□ -1.5
TRAV11-201ENST00000539512 NUP37Q8NFH4 326 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 SLCO2A1Q92959 643 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 RFT1Q96AA3 541 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 NAPBQ9H115 298 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 RNPEPL1Q9HAU8 725 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 SATB2Q9UPW6 733 aa5.71□□□□□ -1.5
TRAV11-201ENST00000539512 ANTXRLA6NF34 631 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.7□□□□□ -1.5
TRAV11-201ENST00000539512 TTI1O43156 1089 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 GLCEO94923 617 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 KRT3P12035 628 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 CPA3P15088 417 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 CTNNB1P35222 781 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 OR1D5P58170 312 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 DHODHQ02127 395 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 ARHGAP1Q07960 439 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 TEFQ10587 303 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 GRB14Q14449 540 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 MRGPRG-AS1Q2M3A8 158 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 LRRC37A5PQ49AS3 106 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 TCEAL6Q6IPX3 200 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 SLC27A4Q6P1M0 643 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 KCTD9Q7L273 389 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 KLHDC8AQ8IYD2 350 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 CASP10Q92851 521 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 SNRNP40Q96DI7 357 aaKnown RBP5.7□□□□□ -1.5
TRAV11-201ENST00000539512 CCDC43Q96MW1 224 aaKnown RBP5.7□□□□□ -1.5
TRAV11-201ENST00000539512 PCDHB18PQ96TA0 734 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 PRMT1Q99873 361 aaKnown RBP5.7□□□□□ -1.5
TRAV11-201ENST00000539512 UBAC1Q9BSL1 405 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 MCRIP2Q9BUT9 160 aaKnown RBP5.7□□□□□ -1.5
TRAV11-201ENST00000539512 TRIM7Q9C029 511 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 SLC39A8Q9C0K1 460 aa5.7□□□□□ -1.5
TRAV11-201ENST00000539512 A0A087X002 238 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 hCG_38984A0A1B0GV85 526 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 CCDC162PA2VCL2 907 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 KPNA7A9QM74 516 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 M0R296 226 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 ACSL4O60488 711 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 CLN5O75503 358 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 SBK2P0C263 348 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 GIFP27352 417 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 COPB2P35606 906 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 IRX4P78413 519 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 IRX1P78414 480 aaPredicted RBP5.69□□□□□ -1.5
TRAV11-201ENST00000539512 SLC34A1Q06495 639 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 MAPK11Q15759 364 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 CCDC184Q52MB2 194 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 KIF6Q6ZMV9 814 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 LRRTM1Q86UE6 522 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 TMEM99Q8N816 258 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 AMER3Q8N944 861 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 RNF149Q8NC42 400 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 RPLP0P6Q8NHW5 317 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 SEPT8Q92599 483 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 LINC00479Q96M42 142 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 NSMCE3Q96MG7 304 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 ZNF559Q9BR84 538 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 SLC5A7Q9GZV3 580 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 ZNF350Q9GZX5 532 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 UPF3AQ9H1J1 476 aaKnown RBP5.69□□□□□ -1.5
TRAV11-201ENST00000539512 C5orf66Q9H5L9 145 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 AKIRIN1Q9H9L7 192 aaPredicted RBP5.69□□□□□ -1.5
TRAV11-201ENST00000539512 CNIH4Q9P003 139 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 MDFICQ9P1T7 246 aa5.69□□□□□ -1.5
TRAV11-201ENST00000539512 NDUFAF8A1L188 74 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 RTCAO00442 366 aaKnown RBP5.68□□□□□ -1.5
TRAV11-201ENST00000539512 CEACAM4O75871 244 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 DUS4LO95620 317 aaKnown RBP5.68□□□□□ -1.5
TRAV11-201ENST00000539512 GAS8O95995 478 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 RPLP0P05388 317 aaKnown RBP5.68□□□□□ -1.5
TRAV11-201ENST00000539512 TRA2AQ13595 282 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRAV11-201ENST00000539512 RPS6KA1Q15418 735 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 IFI44LQ53G44 452 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 ZNF770Q6IQ21 691 aaPredicted RBP5.68□□□□□ -1.5
TRAV11-201ENST00000539512 GSG1LQ6UXU4 331 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 RFPL4BQ6ZWI9 263 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 ELMOD1Q8N336 334 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 TEX26Q8N6G2 289 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 AGAP3Q96P47 875 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 CACNG6Q9BXT2 260 aa5.68□□□□□ -1.5
TRAV11-201ENST00000539512 WWTR1Q9GZV5 400 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms