RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ABCB7O75027 752 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 TNFRSF21O75509 655 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 NTRK1P04629 796 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 HTR1AP08908 422 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 FPR1P21462 350 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 IGFBP5P24593 272 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 RYKP34925 604 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 ITGA1P56199 1179 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 KCNJ10P78508 379 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 SKIV2LQ15477 1246 aaKnown RBP13.44□□□□□ -0.26
LIMK1-208ENST00000538333 NEDD8Q15843 81 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 PRSS53Q2L4Q9 553 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 C9orf50Q5SZB4 431 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 BROXQ5VW32 411 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 FAM46CQ5VWP2 391 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 METRNLQ641Q3 311 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 TMIGD1Q6UXZ0 262 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 LRRTM4Q86VH4 590 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 C2orf73Q8N5S3 287 aaPredicted RBP13.44□□□□□ -0.26
LIMK1-208ENST00000538333 OR5K2Q8NHB8 316 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 CIDECQ96AQ7 238 aaPredicted RBP13.44□□□□□ -0.26
LIMK1-208ENST00000538333 CNDP2Q96KP4 475 aaKnown RBP13.44□□□□□ -0.26
LIMK1-208ENST00000538333 ASPSCR1Q9BZE9 553 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 PLA2G2FQ9BZM2 168 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 ADNPQ9H2P0 1102 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 TIMMDC1Q9NPL8 285 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 ATAD3AQ9NVI7 634 aa13.44□□□□□ -0.26
LIMK1-208ENST00000538333 TRIM64BA6NI03 449 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 MID1O15344 667 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 GPR37L1O60883 481 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 FKBP9O95302 570 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 C6orf47O95873 294 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 KLK1P06870 262 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 EEF1B2P24534 225 aaKnown RBP13.43□□□□□ -0.26
LIMK1-208ENST00000538333 TAS2R50P59544 299 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 GABARAPL2P60520 117 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 C2orf80Q0P641 193 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 ENPP2Q13822 863 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 COX20Q5RI15 118 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 C11orf65Q8NCR3 313 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 OR13F1Q8NGS4 319 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 PPCDCQ96CD2 204 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 NRBF2Q96F24 287 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 CDH7Q9ULB5 785 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 FAF1Q9UNN5 650 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-208ENST00000538333 YBX2Q9Y2T7 364 aaKnown RBP13.43□□□□□ -0.26
LIMK1-208ENST00000538333 ORC6Q9Y5N6 252 aa13.43□□□□□ -0.26
LIMK1-208ENST00000538333 H3BMQ9 156 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 CDK4P11802 303 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 AGXTP21549 392 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 PTX3P26022 381 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 RPL3P39023 403 aaKnown RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 EIF2DP41214 584 aaKnown RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 TPD52P55327 224 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 GRSF1Q12849 480 aaKnown RBP eCLIP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 RAPSNQ13702 412 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 ARHGAP19Q14CB8 494 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 AGERQ15109 404 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 GPR107Q5VW38 600 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 TSEN54Q7Z6J9 526 aaKnown RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 SLC9B2Q86UD5 537 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 MTERF3Q96E29 417 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 COG8Q96MW5 612 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 ACAT2Q9BWD1 397 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 RSPH9Q9H1X1 276 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 RAPGEFL1Q9UHV5 662 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 DNMT3AQ9Y6K1 912 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 STON1Q9Y6Q2 735 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 HEATR5BQ9P2D3 2071 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 A0A1B0GVG6 124 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 MYO1GB0I1T2 1018 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 BCKDKO14874 412 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 SEC14L2O76054 403 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 ATE1O95260 518 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 ETFAP13804 333 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 GSTM2P28161 218 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 TPP2P29144 1249 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 PHEXP78562 749 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 CAMK2GQ13555 558 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 TEAD4Q15561 434 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 CST6Q15828 149 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 CYP2A13Q16696 494 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 C2orf27AQ580R0 203 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 GALNT5Q7Z7M9 940 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 CACUL1Q86Y37 369 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 SPARTQ8N0X7 666 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 KRT78Q8N1N4 520 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 OR52N2Q8NGI0 321 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 TPD52L3Q96J77 140 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 SLC35A5Q9BS91 424 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 TEX101Q9BY14 249 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 ZNF717Q9BY31 904 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 NAA50Q9GZZ1 169 aaKnown RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 RHBGQ9H310 441 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 TRIT1Q9H3H1 467 aaKnown RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 FANCEQ9HB96 536 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 MBNL1Q9NR56 388 aaKnown RBP13.42□□□□□ -0.26
LIMK1-208ENST00000538333 SERGEFQ9UGK8 458 aa13.42□□□□□ -0.26
LIMK1-208ENST00000538333 PADI2Q9Y2J8 665 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms