RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CPSF6Q16630 551 aaKnown RBP eCLIP12.41□□□□□ -0.42
CHFR-216ENST00000538235 CCDC153Q494R4 210 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 MANEAQ5SRI9 462 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 CYB5D1Q6P9G0 228 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 FRMD7Q6ZUT3 714 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 ZC3H7AQ8IWR0 971 aaKnown RBP12.41□□□□□ -0.42
CHFR-216ENST00000538235 HUS1BQ8NHY5 278 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 AGAP11Q8TF27 550 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 STARD8Q92502 1023 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 RERGQ96A58 199 aaPredicted RBP12.41□□□□□ -0.42
CHFR-216ENST00000538235 F2RL3Q96RI0 385 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 CCNL2Q96S94 520 aaPredicted RBP12.41□□□□□ -0.42
CHFR-216ENST00000538235 SH3GL2Q99962 352 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 NTMT1Q9BV86 223 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 RBCK1Q9BYM8 510 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 DPH1Q9BZG8 443 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 SHCBP1LQ9BZQ2 653 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 PRORYQ9H606 182 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 ZNF395Q9H8N7 513 aaPredicted RBP12.41□□□□□ -0.42
CHFR-216ENST00000538235 ACTR8Q9H981 624 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 GPN2Q9H9Y4 310 aaPredicted RBP12.41□□□□□ -0.42
CHFR-216ENST00000538235 DMRT3Q9NQL9 472 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 HCN3Q9P1Z3 774 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 PADI1Q9ULC6 663 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 TMCO1Q9UM00 188 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 PCDHGA6Q9Y5G7 932 aa12.41□□□□□ -0.42
CHFR-216ENST00000538235 TNPO3Q9Y5L0 923 aaKnown RBP12.41□□□□□ -0.42
CHFR-216ENST00000538235 CACNA1BQ00975 2339 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 IGLV3-12A0A075B6K2 115 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 LRIT2A6NDA9 550 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 VSTM2BA6NLU5 285 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 MAGEB17A8MXT2 336 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 TMEM233B4DJY2 109 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 K7ENP7 123 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 SAP18O00422 153 aaKnown RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 MAP3K7O43318 606 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 GALR3O60755 368 aaPredicted RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 PCNAP12004 261 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 CCT5P48643 541 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 HNRNPFP52597 415 aaKnown RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 DNAJB13P59910 316 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 RPS13P62277 151 aaKnown RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 DCDP81605 110 aaKnown RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 PWP1Q13610 501 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 DDX39BQ13838 428 aaKnown RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 MUM1Q2TAK8 710 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 GGTA1PQ4G0N0 100 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 DEFB134Q4QY38 66 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 VWA2Q5GFL6 755 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 ARHGAP40Q5TG30 622 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 YOD1Q5VVQ6 348 aaPredicted RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 METTL2BQ6P1Q9 378 aaKnown RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 MED27Q6P2C8 311 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 INO80CQ6PI98 192 aaPredicted RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 PCSK4Q6UW60 755 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 LAPTM4BQ86VI4 370 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 MYLK4Q86YV6 388 aaPredicted RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 CAMKVQ8NCB2 501 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 TMEM52Q8NDY8 209 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 RDH11Q8TC12 318 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 SLC45A3Q96JT2 553 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 SMC6Q96SB8 1091 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 ZNF382Q96SR6 550 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 MTERF1Q99551 399 aaKnown RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 DRC3Q9H069 523 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 OR51B5Q9H339 312 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 SOX17Q9H6I2 414 aaPredicted RBP12.4□□□□□ -0.42
CHFR-216ENST00000538235 TXLNGQ9NUQ3 528 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 NAALAD2Q9Y3Q0 740 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 ANGPTL3Q9Y5C1 460 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 PTGDR2Q9Y5Y4 395 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 CPAMD8Q8IZJ3 1885 aa12.4□□□□□ -0.42
CHFR-216ENST00000538235 SPENQ96T58 3664 aaKnown RBP12.4□□□□□ -0.43
CHFR-216ENST00000538235 H0YIV9 168 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 TGFBR3LH3BV60 316 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 PRPF4O43172 522 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHFR-216ENST00000538235 CLEC3AO75596 197 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 NSA2O95478 260 aaKnown RBP12.39□□□□□ -0.43
CHFR-216ENST00000538235 CLDN9O95484 217 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 TGFB1P01137 390 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 BPGMP07738 259 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 SERPINA6P08185 405 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 SLC35G6P0C7Q6 338 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 PRKAR1AP10644 381 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 ALOX12P18054 663 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 TAC1P20366 129 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 CERS1P27544 350 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 PTPN4P29074 926 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 GRK3P35626 688 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 SERPINB4P48594 390 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 CCNG1P51959 295 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 ARSFP54793 590 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 MAGOHP61326 146 aaKnown RBP12.39□□□□□ -0.43
CHFR-216ENST00000538235 RUNX2Q13950 521 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 DSG2Q14126 1118 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 FAM53BQ14153 422 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 ERV3-1Q14264 604 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 RBBP7Q16576 425 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 GARNL3Q5VVW2 1013 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms