RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 ELP6Q0PNE2 266 aa13.54□□□□□ -0.24
CLPB-209ENST00000538039 BCL7AQ4VC05 210 aa13.54□□□□□ -0.24
CLPB-209ENST00000538039 PNCKQ6P2M8 343 aa13.54□□□□□ -0.24
CLPB-209ENST00000538039 CHST14Q8NCH0 376 aa13.54□□□□□ -0.24
CLPB-209ENST00000538039 MED8Q96G25 268 aa13.54□□□□□ -0.24
CLPB-209ENST00000538039 PLCXD1Q9NUJ7 323 aa13.54□□□□□ -0.24
CLPB-209ENST00000538039 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
CLPB-209ENST00000538039 PADI2Q9Y2J8 665 aa13.54□□□□□ -0.24
CLPB-209ENST00000538039 PCDHGB3Q9Y5G1 929 aa13.54□□□□□ -0.24
CLPB-209ENST00000538039 IGLV3-16A0A075B6K0 115 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 RPLP0P05388 317 aaKnown RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 GJA1P17302 382 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 UGT2B15P54855 530 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 COPZ1P61923 177 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 VEZF1Q14119 521 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 TSTQ16762 297 aaKnown RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 GPR33Q49SQ1 333 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 Q6ZNB5 142 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 USP43Q70EL4 1123 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 LGI4Q8N135 537 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 NFKBIDQ8NI38 313 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 ZNF486Q96H40 463 aaPredicted RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 KIAA1671Q9BY89 1806 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 RNF186Q9NXI6 227 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 SH3BP4Q9P0V3 963 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 UGT2A1Q9Y4X1 527 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 NPIPB8E9PQR5 432 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 TAF4O00268 1085 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 ARHGEF15O94989 841 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 GASTP01350 101 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 CKMT1AP12532 417 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 ZNF8P17098 575 aaPredicted RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 SOX3P41225 446 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 CSNK1DP48730 415 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 HNRNPFP52597 415 aaKnown RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 TUBA1BP68363 451 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 SPIBQ01892 262 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 SRSF11Q05519 484 aaKnown RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 MTA1Q13330 715 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 PTGES3Q15185 160 aaKnown RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 C10orf62Q5T681 223 aaPredicted RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 TUBA1AQ71U36 451 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 THOC6Q86W42 341 aaKnown RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 SCRN2Q96FV2 425 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 ACER3Q9NUN7 267 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 EHD3Q9NZN3 535 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 ARHGAP33O14559 1287 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 ANXA4P09525 319 aaPredicted RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 BDKRB1P46663 353 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 CYP4F8P98187 520 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 NAE1Q13564 534 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 METTL2BQ6P1Q9 378 aaKnown RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 PAQR6Q6TCH4 344 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 NRARPQ7Z6K4 114 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 DNAJB7Q7Z6W7 309 aaPredicted RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 CCDC190Q86UF4 302 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 CSGALNACT1Q8TDX6 532 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 MCCC1Q96RQ3 725 aaPredicted RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 CDK5RAP1Q96SZ6 601 aaKnown RBP13.53□□□□□ -0.24
CLPB-209ENST00000538039 TCF25Q9BQ70 676 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 RETREG1Q9H6L5 497 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
CLPB-209ENST00000538039 THSD7BQ9C0I4 1608 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 LINC00854A0A1B0GVQ3 168 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 FFAR1O14842 300 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 TNFRSF21O75509 655 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 EFEMP2O95967 443 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 SRCP12931 536 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 PDHA2P29803 388 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 RPS19P39019 145 aaKnown RBP13.52□□□□□ -0.24
CLPB-209ENST00000538039 MEF2AQ02078 507 aaPredicted RBP13.52□□□□□ -0.24
CLPB-209ENST00000538039 SMARCB1Q12824 385 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 MED22Q15528 200 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 CCDC92Q53HC0 331 aaPredicted RBP13.52□□□□□ -0.24
CLPB-209ENST00000538039 CPTPQ5TA50 214 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 HS6ST3Q8IZP7 471 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 CBARPQ8N350 705 aaPredicted RBP13.52□□□□□ -0.24
CLPB-209ENST00000538039 HUS1BQ8NHY5 278 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 ASIC4Q96FT7 647 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 IL4I1Q96RQ9 567 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 RAD9AQ99638 391 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 NEK6Q9HC98 313 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 N6AMT1Q9Y5N5 214 aa13.52□□□□□ -0.24
CLPB-209ENST00000538039 ISPDA4D126 451 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 C6orf47O95873 294 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 HIST1H2AGP0C0S8 130 aaPredicted RBP13.52□□□□□ -0.25
CLPB-209ENST00000538039 CBSLP0DN79 551 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 HIST1H2ADP20671 130 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 CBSP35520 551 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 RFX2P48378 723 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 PRKCDQ05655 676 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 BAK1Q16611 211 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 DUSP7Q16829 419 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 MICAQ29983 383 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 MLIPQ5VWP3 458 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 NPAS3Q8IXF0 933 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 STX19Q8N4C7 294 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 OR4A15Q8NGL6 344 aa13.52□□□□□ -0.25
CLPB-209ENST00000538039 EFHD2Q96C19 240 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms