RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 OSGIN1Q9UJX0 560 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 CCL16O15467 120 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 GNRH1P01148 92 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 TYRP14679 529 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 SLC19A1P41440 591 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 RXRGP48443 463 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 SPIBQ01892 262 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 ELP6Q0PNE2 266 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 TMEM115Q12893 351 aaPredicted RBP13.76□□□□□ -0.21
USP44-203ENST00000537435 TSTA3Q13630 321 aaPredicted RBP13.76□□□□□ -0.21
USP44-203ENST00000537435 CATSPEREQ5SY80 951 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 TMEM220Q6QAJ8 160 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 FCGR1BQ92637 280 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 FOPNLQ96NB1 174 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 DEFB118Q96PH6 123 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 BHLHE41Q9C0J9 482 aaPredicted RBP13.76□□□□□ -0.21
USP44-203ENST00000537435 REEP4Q9H6H4 257 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 RLIMQ9NVW2 624 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 HCFC1R1Q9NWW0 138 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 ATP6V1HQ9UI12 483 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 M0R082 166 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 C6orf47O95873 294 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 CTSLP07711 333 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 TGM1P22735 817 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 XPAP23025 273 aaPredicted RBP13.75□□□□□ -0.21
USP44-203ENST00000537435 TPP2P29144 1249 aaPredicted RBP13.75□□□□□ -0.21
USP44-203ENST00000537435 CLK1P49759 484 aaKnown RBP13.75□□□□□ -0.21
USP44-203ENST00000537435 CDH12P55289 794 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 TLE2Q04725 743 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 ZNF763Q0D2J5 394 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 SFSWAPQ12872 951 aaKnown RBP13.75□□□□□ -0.21
USP44-203ENST00000537435 IFI44LQ53G44 452 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 TECPR1Q7Z6L1 1165 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 CCDC103Q8IW40 242 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 MINDY2Q8NBR6 621 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 IRF7Q92985 503 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 CAPNS2Q96L46 248 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 SLC35A5Q9BS91 424 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 DCSTAMPQ9H295 470 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 LINC00597Q9H2U6 94 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 DSN1Q9H410 356 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 ZBTB20Q9HC78 741 aaPredicted RBP13.75□□□□□ -0.21
USP44-203ENST00000537435 ATAD3AQ9NVI7 634 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 ACSL6Q9UKU0 697 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 TNFRSF21O75509 655 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 IDH2P48735 452 aaKnown RBP13.75□□□□□ -0.21
USP44-203ENST00000537435 TBPL1P62380 186 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 MC1RQ01726 317 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 LRRC74AQ0VAA2 488 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 DNASE1L3Q13609 305 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 SCARB2Q14108 478 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 TBCEQ15813 527 aaPredicted RBP13.75□□□□□ -0.21
USP44-203ENST00000537435 GCNT6Q5T4J0 391 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 ANKRD33Q7Z3H0 272 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 SYTL1Q8IYJ3 562 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 DNAJC22Q8N4W6 341 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 LMNTD1Q8N9Z9 388 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 OR4C15Q8NGM1 316 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 MCFD2Q8NI22 146 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 NFKBIDQ8NI38 313 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 ZNF480Q8WV37 535 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 GGHQ92820 318 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 CIDECQ96AQ7 238 aaPredicted RBP13.75□□□□□ -0.21
USP44-203ENST00000537435 CXorf40BQ96DE9 158 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 NIPSNAP1Q9BPW8 284 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 ZBP1Q9H171 429 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 PRDM8Q9NQV8 689 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 RAD18Q9NS91 495 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 NFKBIL1Q9UBC1 381 aaPredicted RBP13.75□□□□□ -0.21
USP44-203ENST00000537435 SH2B3Q9UQQ2 575 aa13.75□□□□□ -0.21
USP44-203ENST00000537435 PRAMEF25A6NGN4 478 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 SAP18O00422 153 aaKnown RBP13.74□□□□□ -0.21
USP44-203ENST00000537435 ZNF197O14709 1029 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 AIREO43918 545 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 NUDT6P53370 316 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 CD300CQ08708 224 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 E2F2Q14209 437 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 SLBPQ14493 270 aaKnown RBP eCLIP13.74□□□□□ -0.21
USP44-203ENST00000537435 EXOC3L2Q2M3D2 409 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 TRIM60Q495X7 471 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 CYP27C1Q4G0S4 372 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 CCDC149Q6ZUS6 474 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 ARMCX6Q7L4S7 300 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 COMMD6Q7Z4G1 85 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 LGI4Q8N135 537 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 KREMEN2Q8NCW0 462 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 OR52N2Q8NGI0 321 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 GOT1L1Q8NHS2 421 aaPredicted RBP13.74□□□□□ -0.21
USP44-203ENST00000537435 RHOXF1Q8NHV9 184 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 MYDGFQ969H8 173 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 AP2M1Q96CW1 435 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 REPS1Q96D71 796 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 TCEAL4Q96EI5 215 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 VPS35Q96QK1 796 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 TCF25Q9BQ70 676 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 PLCXD1Q9NUJ7 323 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 PAIP2BQ9ULR5 123 aaKnown RBP13.74□□□□□ -0.21
USP44-203ENST00000537435 PCDHGA2Q9Y5H1 932 aa13.74□□□□□ -0.21
USP44-203ENST00000537435 PRRC2BQ5JSZ5 2229 aaKnown RBP13.74□□□□□ -0.21
USP44-203ENST00000537435 DENND4CQ5VZ89 1909 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms