RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RAB14P61106 215 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 UFM1P61960 85 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 CAP1Q01518 475 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 PRKCZQ05513 592 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 RBBP4Q09028 425 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 PLA2G7Q13093 441 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 KRR1Q13601 381 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 TRAM2Q15035 370 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 HSDL1Q3SXM5 330 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 GPR33Q49SQ1 333 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 CARD16Q5EG05 197 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 CLLU1Q5K131 121 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 TDRD10Q5VZ19 366 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 TRNP1Q6NT89 227 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SLC39A4Q6P5W5 647 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 GPRIN3Q6ZVF9 776 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 TRMT11Q7Z4G4 463 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 GDPD1Q8N9F7 314 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 PAPD5Q8NDF8 572 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 ZNF248Q8NDW4 579 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 GPR150Q8NGU9 434 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 LPAR1Q92633 364 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 NSMAFQ92636 917 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 APBB2Q92870 758 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 ZBTB45Q96K62 511 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 UBXN10Q96LJ8 280 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 COQ10AQ96MF6 247 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 NSMCE2Q96MF7 247 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 NSUN5Q96P11 429 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 SORCS2Q96PQ0 1159 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 RBBP8Q99708 897 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 APOL4Q9BPW4 351 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 TREX2Q9BQ50 279 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 SLC19A3Q9BZV2 496 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 MIXL1Q9H2W2 232 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 DUSP21Q9H596 190 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 PDZD7Q9H5P4 517 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 NIPAL2Q9H841 368 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 EVA1AQ9H8M9 152 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SRA1Q9HD15 236 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 PDLIM7Q9NR12 457 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 RAD18Q9NS91 495 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 IMPAD1Q9NX62 359 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SLCO1C1Q9NYB5 712 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 IL20Q9NYY1 176 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 VTI1BQ9UEU0 232 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 ACSL5Q9ULC5 683 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 MKL2Q9ULH7 1088 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 USP18Q9UMW8 372 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 VCANP13611 3396 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 CXorf65A6NEN9 183 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 FABP12A6NFH5 140 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 GPR31O00270 319 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 MEIS2O14770 477 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 ANKRD28O15084 1053 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SCAMP1O15126 338 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 INPPL1O15357 1258 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SLC16A6O15403 523 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SOX15O60248 233 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 BRINP1O60477 761 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 MAFO75444 373 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 NCR1O76036 304 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 B3GALT4O96024 378 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 C1RP00736 705 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 CST3P01034 146 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 RPLP0P05388 317 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 SERPINF2P08697 491 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 GAP43P17677 238 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 PSMB4P28070 264 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 DCTP40126 519 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 MAPK8P45983 427 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 DAPP51397 102 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 RIDAP52758 137 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 CASP9P55211 416 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SNX16P57768 344 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 S100A12P80511 92 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SIM1P81133 766 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 TNFRSF17Q02223 184 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SCN1BQ07699 218 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 CSHL1Q14406 222 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 GINS1Q14691 196 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 RPS6KA2Q15349 733 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 FAM83EQ2M2I3 478 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 QRICH1Q2TAL8 776 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 AP5B1Q2VPB7 878 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 KLHL12Q53G59 568 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 HSD17B12Q53GQ0 312 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 MANEAQ5SRI9 462 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 PRAMEF18Q5VWM3 479 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 MTFR2Q6P444 385 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SLC46A3Q7Z3Q1 461 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 ZZZ3Q8IYH5 903 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 PHACTR4Q8IZ21 702 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 C10orf111Q8N326 155 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 PGBD3Q8N328 593 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 RYBPQ8N488 228 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 CDYL2Q8N8U2 506 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 OR7G3Q8NG95 312 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 OR5B17Q8NGF7 314 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms