RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ISL1P61371 349 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 NFATC3Q12968 1075 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 ZC3H12BQ5HYM0 836 aaKnown RBP12.83□□□□□ -0.35
VPS33B-202ENST00000535906 PRAMEF14Q5SWL7 426 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 ANXA8L1Q5VT79 327 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 ZNF691Q5VV52 312 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 PRAMEF13Q5VWM6 474 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 FAM46CQ5VWP2 391 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 DCP2Q8IU60 420 aaKnown RBP12.83□□□□□ -0.35
VPS33B-202ENST00000535906 SYNPOQ8N3V7 929 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 FNDC8Q8TC99 324 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 ZFP90Q8TF47 636 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 RAB2BQ8WUD1 216 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 TBC1D20Q96BZ9 403 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 KXD1Q9BQD3 176 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 PBX4Q9BYU1 374 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 LHPPQ9H008 270 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 MBNL1Q9NR56 388 aaKnown RBP12.83□□□□□ -0.35
VPS33B-202ENST00000535906 SIRT5Q9NXA8 310 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 TMEFF2Q9UIK5 374 aaPredicted RBP12.83□□□□□ -0.35
VPS33B-202ENST00000535906 hCG_2014768A0A024R1R8 64 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 SH3PXD2BA1X283 911 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 RNASET2O00584 256 aaKnown RBP12.83□□□□□ -0.36
VPS33B-202ENST00000535906 HTR1AP08908 422 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 CD247P20963 164 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 RAD23AP54725 363 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 IL18R1Q13478 541 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 RGNQ15493 299 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 CST6Q15828 149 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 C2orf27AQ580R0 203 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 C10orf62Q5T681 223 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-202ENST00000535906 GTF2IRD2BQ6EKJ0 949 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 ERICH5Q6P6B1 374 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 SHQ1Q6PI26 577 aaKnown RBP12.83□□□□□ -0.36
VPS33B-202ENST00000535906 VN1R5Q7Z5H4 357 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 GTF2IRD2Q86UP8 949 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 LRRTM4Q86VH4 590 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 SETD7Q8WTS6 366 aaKnown RBP12.83□□□□□ -0.36
VPS33B-202ENST00000535906 SGCDQ92629 289 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 MAL2Q969L2 176 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 HSPBAP1Q96EW2 488 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 BARD1Q99728 777 aaKnown RBP12.83□□□□□ -0.36
VPS33B-202ENST00000535906 REEP4Q9H6H4 257 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 ATP6V1HQ9UI12 483 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 MAPRE3Q9UPY8 281 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 ORC6Q9Y5N6 252 aa12.83□□□□□ -0.36
VPS33B-202ENST00000535906 LINC01565O15544 149 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 PFDN1O60925 122 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 DIRAS1O95057 198 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 SEMG1P04279 462 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 KLK1P06870 262 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 KELP23276 732 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 RYKP34925 604 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 CRYBA2P53672 197 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 HBA1P69905 142 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 VLDLRP98155 873 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 RPA4Q13156 261 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 LAPTM4AQ15012 233 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
VPS33B-202ENST00000535906 METRNLQ641Q3 311 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 LAIR2Q6ISS4 152 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 TMIGD1Q6UXZ0 262 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 FAM129CQ86XR2 697 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 DCUN1D3Q8IWE4 304 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 YAF2Q8IY57 180 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 NAGSQ8N159 534 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 OR4A15Q8NGL6 344 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 C16orf78Q8WTQ4 265 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 GABARAPL1Q9H0R8 117 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 GPN2Q9H9Y4 310 aaPredicted RBP12.82□□□□□ -0.36
VPS33B-202ENST00000535906 GPATCH2Q9NW75 528 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 OR1A2Q9Y585 309 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 hCG_2039718K7EN88 272 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 FOXD2O60548 495 aaPredicted RBP12.82□□□□□ -0.36
VPS33B-202ENST00000535906 FURINP09958 794 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 ITGAMP11215 1152 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 PIK3CBP42338 1070 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 RANBP1P43487 201 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 CASP9P55211 416 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 TAS2R50P59544 299 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 VEZF1Q14119 521 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 MPEG1Q2M385 716 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 ZNF829Q3KNS6 432 aaPredicted RBP12.82□□□□□ -0.36
VPS33B-202ENST00000535906 SYCE2Q6PIF2 218 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 LCTLQ6UWM7 567 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 ZNF852Q6ZMS4 543 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 CBLL1Q75N03 491 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 CEP68Q76N32 757 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 METTL4Q8N3J2 472 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 BPIFB6Q8NFQ5 453 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 OR5K2Q8NHB8 316 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 TANKQ92844 425 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 FGF14Q92915 247 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 CIDECQ96AQ7 238 aaPredicted RBP12.82□□□□□ -0.36
VPS33B-202ENST00000535906 CXorf40BQ96DE9 158 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 MYADMQ96S97 322 aa12.82□□□□□ -0.36
VPS33B-202ENST00000535906 RPP25Q9BUL9 199 aaKnown RBP12.82□□□□□ -0.36
VPS33B-202ENST00000535906 SORBS1Q9BX66 1292 aaKnown RBP12.82□□□□□ -0.36
VPS33B-202ENST00000535906 BHLHE41Q9C0J9 482 aaPredicted RBP12.82□□□□□ -0.36
VPS33B-202ENST00000535906 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms