RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 MC1RQ01726 317 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 CBX2Q14781 532 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-232ENST00000535094 CLLU1OSQ5K130 101 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 GCNT6Q5T4J0 391 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 TCEANCQ8N8B7 351 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 FYTTD1Q96QD9 318 aaKnown RBP15.32■□□□□ 0.04
MCF2L-232ENST00000535094 PDFQ9HBH1 243 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 RANGRFQ9HD47 186 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-232ENST00000535094 SERHLQ9NQF3 203 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 PIKFYVEQ9Y2I7 2098 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 ADAM12O43184 909 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 CCNYL3P0C7X3 344 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 CCR7P32248 378 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 ARPC4P59998 168 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 KIAA0040Q15053 153 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 NCF4Q15080 339 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 UGT8Q16880 541 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 RNASE12Q5GAN4 147 aaKnown RBP15.32■□□□□ 0.04
MCF2L-232ENST00000535094 NCEH1Q6PIU2 408 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 RRM2BQ7LG56 351 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 ZNF551Q7Z340 670 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-232ENST00000535094 SLC46A3Q7Z3Q1 461 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 LAX1Q8IWV1 398 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 MYLIPQ8WY64 445 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 SLC29A3Q9BZD2 475 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 SMURF1Q9HCE7 757 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 PSORS1C1Q9UIG5 152 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 SLC6A14Q9UN76 642 aa15.32■□□□□ 0.04
MCF2L-232ENST00000535094 TRBC2A0A5B9 178 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 OR6C75A6NL08 312 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 FADS2P1A8MWK0 482 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 OAZ2O95190 189 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 EIF4EBP2Q13542 120 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-232ENST00000535094 SPRYD7Q5W111 196 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 PPP2R2DQ66LE6 453 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 TXNDC8Q6A555 127 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 VRK3Q8IV63 474 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 GPR26Q8NDV2 337 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 RAB8BQ92930 207 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 PPCDCQ96CD2 204 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 FOPNLQ96NB1 174 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 P2RY13Q9BPV8 354 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 RUVBL1Q9Y265 456 aaKnown RBP15.31■□□□□ 0.04
MCF2L-232ENST00000535094 SPIN1Q9Y657 262 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-232ENST00000535094 FAM240BA0A1B0GVZ2 78 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 A0A1W2PQ09 198 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 SLC35F4A4IF30 521 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 JUNDP17535 347 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 GGT2P36268 569 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 GSTM5P46439 218 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 HNRNPA0Q13151 305 aaKnown RBP15.31■□□□□ 0.04
MCF2L-232ENST00000535094 C5orf22Q49AR2 442 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 RSPO2Q6UXX9 243 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-232ENST00000535094 DEFB128Q7Z7B8 93 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 NPAS3Q8IXF0 933 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 TMEM184CQ9NVA4 438 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 POFUT2Q9Y2G5 429 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 PCDHB11Q9Y5F2 797 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 HSPE1-MOB4S4R3N1 261 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 BPTFQ12830 3046 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 CAV3P56539 151 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 RPS13P62277 151 aaKnown RBP15.31■□□□□ 0.04
MCF2L-232ENST00000535094 CSNK2BP67870 215 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 C22orf42Q6IC83 251 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 CBLL1Q75N03 491 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 MRPL10Q7Z7H8 261 aaKnown RBP15.31■□□□□ 0.04
MCF2L-232ENST00000535094 FBXO22Q8NEZ5 403 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 UPF1Q92900 1129 aaKnown RBP eCLIP15.31■□□□□ 0.043e-8■■■□□ 17
MCF2L-232ENST00000535094 RIMKLBQ9ULI2 386 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 CLEC4AQ9UMR7 237 aa15.31■□□□□ 0.04
MCF2L-232ENST00000535094 E7EQ34 232 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 GJA1P17302 382 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 AMD1P17707 334 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 TGFBR2P37173 567 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 BDKRB1P46663 353 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 FLT3LGP49771 235 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 RING1Q06587 406 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 COX20Q5RI15 118 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 LDLRAD1Q5T700 205 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 PAMR1Q6UXH9 720 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 ZNF852Q6ZMS4 543 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 TAS1R1Q7RTX1 841 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 ELMOD1Q8N336 334 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 IQCF1Q8N6M8 205 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 CLP1Q92989 425 aaKnown RBP15.3■□□□□ 0.04
MCF2L-232ENST00000535094 NTMT1Q9BV86 223 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 CLEC2DQ9UHP7 191 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 CCDC88CQ9P219 2028 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 TRAV19A0A0A6YYK7 116 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 A0A0G2JN53 185 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 GABRR3A8MPY1 467 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 ARHGAP33O14559 1287 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 DSCR3O14972 297 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 TLX2O43763 284 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-232ENST00000535094 IFNW1P05000 195 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 HLA-EP13747 358 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 RORCP51449 518 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 CDK6Q00534 326 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 DOC2AQ14183 400 aa15.3■□□□□ 0.04
MCF2L-232ENST00000535094 PTGES3Q15185 160 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms