RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 WNT9BO14905 357 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 TIMM23O14925 209 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 HSPA12AO43301 675 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 B3GAT3O94766 335 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 CLDN14O95500 239 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 HSPA4LO95757 839 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 FAM157CP0CG43 387 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 ARSBP15848 533 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 CD58P19256 250 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 HNRNPH1P31943 449 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 CCKBRP32239 447 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 BRCC3P46736 316 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 LIG4P49917 911 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 RAD23AP54725 363 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 ZP1P60852 638 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 PPARDQ03181 441 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 KRTAP1-1Q07627 177 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 DRP2Q13474 957 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF235Q14590 738 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 RBMS2Q15434 407 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 EFNB3Q15768 340 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 ASIC2Q16515 512 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 PNLIPRP3Q17RR3 467 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF805Q5CZA5 627 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 C9orf152Q5JTZ5 239 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 VAX1Q5SQQ9 334 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 SHEQ5VZ18 495 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 GGNBP1Q5YKI7 109 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF626Q68DY1 528 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 SHC4Q6S5L8 630 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 SHFQ7M4L6 423 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 TMEM150AQ86TG1 271 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 ITIH5Q86UX2 942 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 KCNMB4Q86W47 210 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 VSIG1Q86XK7 387 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 MEX3DQ86XN8 651 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 CCDC60Q8IWA6 550 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 FOXRED2Q8IWF2 684 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 ARFGAP1Q8N6T3 406 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 AMER3Q8N944 861 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 SORCS2Q96PQ0 1159 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 CCDC3Q9BQI4 270 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 VAT1LQ9HCJ6 419 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 AGPAT4Q9NRZ5 378 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 ZBTB40Q9NUA8 1239 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 TRNAU1APQ9NX07 287 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 PSD3Q9NYI0 1048 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 CRNNQ9UBG3 495 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 CCL27Q9Y4X3 112 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 SRPRBQ9Y5M8 271 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 STAB2Q8WWQ8 2551 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 CMYA5Q8N3K9 4069 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 IGKV6D-21A0A0A0MT36 114 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 EME2A4GXA9 379 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 URADA6NGE7 173 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 TRIM64A6NGJ6 449 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 TRIM64BA6NI03 449 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 BECN2A8MW95 431 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 MS4A18H0YCH9 400 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 CCL21O00585 134 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 SMAD9O15198 467 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 NEBLO76041 1014 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 SOX30O94993 753 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 LCATP04180 440 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 TPOP07202 933 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 ABCB1P08183 1280 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 PRLRP16471 622 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 MSH2P43246 934 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 CAPZA2P47755 286 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 GPR18Q14330 331 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 HNF4GQ14541 408 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 IL11RAQ14626 422 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 PTGR1Q14914 329 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 ZC2HC1CQ53FD0 456 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 ZNF628Q5EBL2 1059 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 MTX3Q5HYI7 312 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 MORN5Q5VZ52 161 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 CES4AQ5XG92 561 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 APLFQ8IW19 511 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 AADATQ8N5Z0 425 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 NEXN-AS1Q8NBZ9 246 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 C7orf57Q8NEG2 295 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 NSMCE1Q8WV22 266 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 WASF1Q92558 559 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 GRAMD2BQ96HH9 432 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 TTC14Q96N46 770 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 SLC22A12Q96S37 553 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 CDRT15Q96T59 188 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 CCDC106Q9BWC9 280 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 SPRY4Q9C004 299 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 NAPBQ9H115 298 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 PPIL3Q9H2H8 161 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 DENND2DQ9H6A0 471 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 MAGIXQ9H6Y5 334 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 SEBOXQ9HB31 216 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 TRPC7Q9HCX4 862 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 OR14J1Q9UGF5 321 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 ACSL5Q9ULC5 683 aa4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 PPIEQ9UNP9 301 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-223ENST00000534442 HS3ST3B1Q9Y662 390 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms