RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 ASMTP46597 345 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 PPM1FP49593 454 aaPredicted RBP10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 CLNS1AP54105 237 aaKnown RBP10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 RPS15AP62244 130 aaKnown RBP10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 HMGCS1Q01581 520 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 RELAQ04206 551 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 TGM3Q08188 693 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 ILKQ13418 452 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 CUL3Q13618 768 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 SLC5A12Q1EHB4 618 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 DPY19L1Q2PZI1 675 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 GUSBP11Q6P575 273 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 SCIMPQ6UWF3 145 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 ZNF438Q7Z4V0 828 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 ADGRF3Q8IZF5 1079 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 SRFBP1Q8NEF9 429 aaKnown RBP10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 OR2T11Q8NH01 316 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 ZUFSPQ96AP4 578 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 MCUR1Q96AQ8 359 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 PRAP1Q96NZ9 151 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 SARGQ9BW04 601 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 LRMDAQ9H2I8 198 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 MMADHCQ9H3L0 296 aaPredicted RBP10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 EFCAB1Q9HAE3 211 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 DMRT3Q9NQL9 472 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 FARSBQ9NSD9 589 aaKnown RBP10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 HRASLS2Q9NWW9 162 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 ACTR10Q9NZ32 417 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 CCDC167Q9P0B6 97 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 U3KQA8 63 aa10.47□□□□□ -0.73
CCDC90B-218ENST00000533761 PRAMEF33A0A0G2JMD5 474 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 ARHGAP10A1A4S6 786 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 OR5K3A6NET4 321 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 URADA6NGE7 173 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 MAGEB17A8MXT2 336 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 H0YHG0 523 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 OR1F1O43749 312 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 PRICKLE3O43900 615 aaPredicted RBP10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 PRMT3O60678 531 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 CLEC3AO75596 197 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 UBXN7O94888 489 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 KRT16P08779 473 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 ALDOCP09972 364 aaKnown RBP10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 CDK4P11802 303 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 COX4I1P13073 169 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 CEACAM1P13688 526 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 JAK1P23458 1154 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 RPL3P39023 403 aaKnown RBP10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 NEK2P51955 445 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 RAP1GDS1P52306 607 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 ARFIP1P53367 373 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 GPLD1P80108 840 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 ART3Q13508 389 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 NR1D2Q14995 579 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 TMEM35AQ53FP2 167 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 AGKQ53H12 422 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 COQ5Q5HYK3 327 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 IL23RQ5VWK5 629 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 CYP20A1Q6UW02 462 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 SPESP1Q6UW49 350 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 C16orf89Q6UX73 402 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 GLRX5Q86SX6 157 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 CARFQ8N187 725 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 DEFB124Q8NES8 71 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 IFI44Q8TCB0 444 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 CCDC74AQ96AQ1 378 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 AHCYL2Q96HN2 611 aaKnown RBP10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 MARK4Q96L34 752 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 PRPF18Q99633 342 aaKnown RBP10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 BTBD10Q9BSF8 475 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 RTKNQ9BST9 563 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 DPH7Q9BTV6 452 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 ABCG4Q9H172 646 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 CCL27Q9Y4X3 112 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 POLR3HQ9Y535 204 aaPredicted RBP10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 GPR45Q9Y5Y3 372 aa10.46□□□□□ -0.74
CCDC90B-218ENST00000533761 PCM1Q15154 2024 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 DMXL1Q9Y485 3027 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 A0A088AWK7 358 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 A0A0J9YY10 115 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 FAM234BA2RU67 622 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 PRAMEF4O60810 478 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 DNAJC8O75937 253 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 F12P00748 615 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 SLC35G6P0C7Q6 338 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 UGT2B7P16662 529 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 POLR2CP19387 275 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 PRPS1L1P21108 318 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 ZNF10P21506 573 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 PSMB5P28074 263 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 TSFMP43897 325 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 CAPZBP47756 277 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 STXBP1P61764 594 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 RPS13P62277 151 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 CSNK1G2P78368 415 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 E2F1Q01094 437 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 RGS1Q08116 209 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 RFTN2Q52LD8 501 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 PRAMEF9Q5VWM5 478 aa10.45□□□□□ -0.74
CCDC90B-218ENST00000533761 SNX32Q86XE0 403 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms