RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 FAM170BA6NMN3 283 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 E7EQ34 232 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 CLIC1O00299 241 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 RNASET2O00584 256 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 FPGTO14772 594 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 TPST1O60507 370 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 TBX19O60806 448 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 SEMA3DO95025 777 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 ADH1BP00325 375 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 ALBP02768 609 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 ALPLP05186 524 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 TDGF1P13385 188 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 COX7A2P14406 83 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 DDX5P17844 614 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 CSRP1P21291 193 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 FCARP24071 287 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 CXCR2P25025 360 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 TACR1P25103 407 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 OPRD1P41143 372 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 VIPR2P41587 438 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 BDKRB1P46663 353 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 SLC6A11P48066 632 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 NEK2P51955 445 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 CTBSQ01459 385 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 DYNC1I2Q13409 638 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 HTR4Q13639 388 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 RUNX3Q13761 415 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 NADK2Q4G0N4 442 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 IYDQ6PHW0 289 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 XKR5Q6UX68 686 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 IKBIPQ70UQ0 350 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 MTSS1LQ765P7 747 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 HIPK1Q86Z02 1210 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 ZDHHC13Q8IUH4 622 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 DCUN1D3Q8IWE4 304 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 FAM181AQ8N9Y4 354 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 FAM47BQ8NA70 645 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 FAM110BQ8TC76 370 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 FIG4Q92562 907 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 TMBIM1Q969X1 311 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 RAD51AP1Q96B01 352 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 NRBF2Q96F24 287 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 ZNF764Q96H86 408 aaPredicted RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 PYURFQ96I23 114 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 VPS50Q96JG6 964 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 CNDP2Q96KP4 475 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 SEPHS2Q99611 448 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 RBM4BQ9BQ04 359 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 WRAP53Q9BUR4 548 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 DUSP26Q9BV47 211 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 RBM4Q9BWF3 364 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 TRIM8Q9BZR9 551 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 GABARAPL1Q9H0R8 117 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 OR52A5Q9H2C5 316 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 ARRDC1-AS1Q9H2J1 176 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 MTG2Q9H4K7 406 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 IKZF5Q9H5V7 419 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 FBRSQ9HAH7 460 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 PELI2Q9HAT8 420 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 TRPV5Q9NQA5 729 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 PAPOLBQ9NRJ5 636 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 ATAD3AQ9NVI7 634 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 DDX18Q9NVP1 670 aaKnown RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 SPATA7Q9P0W8 599 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 ATXN10Q9UBB4 475 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 ZNF282Q9UDV7 671 aaPredicted RBP9.29□□□□□ -0.92
CHKA-207ENST00000533728 USP22Q9UPT9 525 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 PCDHB11Q9Y5F2 797 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 PLXND1Q9Y4D7 1925 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 FAM149AA5PLN7 773 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 MAGEB17A8MXT2 336 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 G3V2T6 193 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 PDLIM1O00151 329 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 POP7O75817 140 aaKnown RBP9.28□□□□□ -0.92
CHKA-207ENST00000533728 PGM3O95394 542 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 THRBP10828 461 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 GP1BBP13224 206 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 NPPBP16860 134 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 PREPP48147 710 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 TBPL1P62380 186 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 RAE1P78406 368 aaKnown RBP9.28□□□□□ -0.92
CHKA-207ENST00000533728 PPP2R2BQ00005 443 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 TAP2Q03519 686 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 DMPKQ09013 629 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 LSAMPQ13449 338 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 CAMK2GQ13555 558 aaPredicted RBP9.28□□□□□ -0.92
CHKA-207ENST00000533728 PDE7AQ13946 482 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 GK3PQ14409 553 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 VMACQ2NL98 169 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 PGS1Q32NB8 556 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
CHKA-207ENST00000533728 RBM48Q5RL73 367 aaKnown RBP9.28□□□□□ -0.92
CHKA-207ENST00000533728 CCNYL2Q5T2Q4 361 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 ZNF648Q5T619 568 aaPredicted RBP9.28□□□□□ -0.92
CHKA-207ENST00000533728 PIP5KL1Q5T9C9 394 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 CPTPQ5TA50 214 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 OR4F3Q6IEY1 312 aa9.28□□□□□ -0.92
CHKA-207ENST00000533728 TTC33Q6PID6 262 aaPredicted RBP9.28□□□□□ -0.92
CHKA-207ENST00000533728 NXPE4Q6UWF7 544 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms